Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 ERI1YPL096C-A 207 nt5.96□□□□□ -1.46
VPS38Q05919 RPT4YOR259C 1314 nt5.96□□□□□ -1.46
VPS38Q05919 SHM1YBR263W 1473 nt5.96□□□□□ -1.46
VPS38Q05919 YCR047W-AYCR047W-A 207 nt5.95□□□□□ -1.46
VPS38Q05919 SIT4YDL047W 936 nt5.95□□□□□ -1.46
VPS38Q05919 SPO7YAL009W 780 nt5.95□□□□□ -1.46
VPS38Q05919 SMF3YLR034C 1422 nt5.95□□□□□ -1.46
VPS38Q05919 PGA3YML125C 939 nt5.95□□□□□ -1.46
VPS38Q05919 SIA1YOR137C 1869 nt5.95□□□□□ -1.46
VPS38Q05919 ATG7YHR171W 1893 nt5.94□□□□□ -1.46
VPS38Q05919 RAT1YOR048C 3021 nt5.94□□□□□ -1.46
VPS38Q05919 ABZ1YNR033W 2364 nt5.94□□□□□ -1.46
VPS38Q05919 SHE10YGL228W 1734 nt5.94□□□□□ -1.46
VPS38Q05919 AIM17YHL021C 1398 nt5.93□□□□□ -1.46
VPS38Q05919 BNA5YLR231C 1362 nt5.93□□□□□ -1.46
VPS38Q05919 ASF2YDL197C 1578 nt5.93□□□□□ -1.46
VPS38Q05919 YDR541CYDR541C 1035 nt5.93□□□□□ -1.46
VPS38Q05919 YIL077CYIL077C 963 nt5.93□□□□□ -1.46
VPS38Q05919 PAN6YIL145C 930 nt5.93□□□□□ -1.46
VPS38Q05919 MND2YIR025W 1107 nt5.93□□□□□ -1.46
VPS38Q05919 YJU2YKL095W 837 nt5.93□□□□□ -1.46
VPS38Q05919 YKR041WYKR041W 753 nt5.93□□□□□ -1.46
VPS38Q05919 YLR126CYLR126C 756 nt5.93□□□□□ -1.46
VPS38Q05919 RDL2YOR286W 450 nt5.93□□□□□ -1.46
VPS38Q05919 RPO26YPR187W 468 nt5.93□□□□□ -1.46
VPS38Q05919 YEL020CYEL020C 1683 nt5.93□□□□□ -1.46
VPS38Q05919 ASN1YPR145W 1719 nt5.93□□□□□ -1.46
VPS38Q05919 PUF3YLL013C 2640 nt5.92□□□□□ -1.46
VPS38Q05919 NCS6YGL211W 1080 nt5.92□□□□□ -1.46
VPS38Q05919 MRPL15YLR312W-A 762 nt5.92□□□□□ -1.46
VPS38Q05919 YML101C-AYML101C-A 318 nt5.92□□□□□ -1.46
VPS38Q05919 YNR048WYNR048W 1182 nt5.92□□□□□ -1.46
VPS38Q05919 SNT2YGL131C 4212 nt5.91□□□□□ -1.46
VPS38Q05919 MDH3YDL078C 1032 nt5.91□□□□□ -1.46
VPS38Q05919 GCS1YDL226C 1059 nt5.91□□□□□ -1.46
VPS38Q05919 VMA16YHR026W 642 nt5.91□□□□□ -1.46
VPS38Q05919 YLR296WYLR296W 327 nt5.91□□□□□ -1.46
VPS38Q05919 FOL1YNL256W 2475 nt5.91□□□□□ -1.46
VPS38Q05919 SUB2YDL084W 1341 nt5.91□□□□□ -1.46
VPS38Q05919 HRP1YOL123W 1605 nt5.91□□□□□ -1.46
VPS38Q05919 ATG18YFR021W 1503 nt5.9□□□□□ -1.46
VPS38Q05919 YIR007WYIR007W 2295 nt5.9□□□□□ -1.46
VPS38Q05919 SKN1YGR143W 2316 nt5.9□□□□□ -1.46
VPS38Q05919 SNF11YDR073W 510 nt5.9□□□□□ -1.46
VPS38Q05919 YDR154CYDR154C 351 nt5.9□□□□□ -1.46
VPS38Q05919 TAF11YML015C 1041 nt5.9□□□□□ -1.46
VPS38Q05919 SPG4YMR107W 348 nt5.9□□□□□ -1.46
VPS38Q05919 YPR195CYPR195C 330 nt5.9□□□□□ -1.46
VPS38Q05919 DED81YHR019C 1665 nt5.9□□□□□ -1.47
VPS38Q05919 PRP40YKL012W 1752 nt5.9□□□□□ -1.47
VPS38Q05919 NOP7YGR103W 1818 nt5.9□□□□□ -1.47
VPS38Q05919 VTH1YIL173W 4650 nt5.9□□□□□ -1.47
VPS38Q05919 VTH2YJL222W 4650 nt5.9□□□□□ -1.47
VPS38Q05919 GUS1YGL245W 2127 nt5.89□□□□□ -1.47
VPS38Q05919 OCA1YNL099C 717 nt5.89□□□□□ -1.47
VPS38Q05919 YNL194CYNL194C 906 nt5.89□□□□□ -1.47
VPS38Q05919 UBC4YBR082C 447 nt5.89□□□□□ -1.47
VPS38Q05919 RPT2YDL007W 1314 nt5.89□□□□□ -1.47
VPS38Q05919 DPH2YKL191W 1605 nt5.88□□□□□ -1.47
VPS38Q05919 BRF1YGR246C 1791 nt5.88□□□□□ -1.47
VPS38Q05919 EAF5YEL018W 840 nt5.88□□□□□ -1.47
VPS38Q05919 VHS1YDR247W 1386 nt5.88□□□□□ -1.47
VPS38Q05919 CHL4YDR254W 1377 nt5.88□□□□□ -1.47
VPS38Q05919 SIR2YDL042C 1689 nt5.88□□□□□ -1.47
VPS38Q05919 SSY5YJL156C 2100 nt5.87□□□□□ -1.47
VPS38Q05919 RPT1YKL145W 1404 nt5.86□□□□□ -1.47
VPS38Q05919 YDL144CYDL144C 1071 nt5.86□□□□□ -1.47
VPS38Q05919 POR2YIL114C 846 nt5.86□□□□□ -1.47
VPS38Q05919 MTW1YAL034W-A 870 nt5.86□□□□□ -1.47
VPS38Q05919 TKL1YPR074C 2043 nt5.86□□□□□ -1.47
VPS38Q05919 NRD1YNL251C 1728 nt5.85□□□□□ -1.47
VPS38Q05919 tN(GUU)CtN(GUU)C 74 nt5.85□□□□□ -1.47
VPS38Q05919 tN(GUU)FtN(GUU)F 74 nt5.85□□□□□ -1.47
VPS38Q05919 tN(GUU)GtN(GUU)G 74 nt5.85□□□□□ -1.47
VPS38Q05919 tN(GUU)KtN(GUU)K 74 nt5.85□□□□□ -1.47
VPS38Q05919 tN(GUU)LtN(GUU)L 74 nt5.85□□□□□ -1.47
VPS38Q05919 tN(GUU)N1tN(GUU)N1 74 nt5.85□□□□□ -1.47
VPS38Q05919 tN(GUU)N2tN(GUU)N2 74 nt5.85□□□□□ -1.47
VPS38Q05919 tN(GUU)O1tN(GUU)O1 74 nt5.85□□□□□ -1.47
VPS38Q05919 tN(GUU)O2tN(GUU)O2 74 nt5.85□□□□□ -1.47
VPS38Q05919 tN(GUU)PtN(GUU)P 74 nt5.85□□□□□ -1.47
VPS38Q05919 PIN2YOR104W 849 nt5.85□□□□□ -1.47
VPS38Q05919 GEP3YOR205C 1671 nt5.85□□□□□ -1.47
VPS38Q05919 SRP101YDR292C 1866 nt5.84□□□□□ -1.47
VPS38Q05919 HAL1YPR005C 885 nt5.84□□□□□ -1.47
VPS38Q05919 RCK1YGL158W 1539 nt5.84□□□□□ -1.48
VPS38Q05919 QDR1YIL120W 1692 nt5.83□□□□□ -1.48
VPS38Q05919 COX26YDR119W-A 201 nt5.83□□□□□ -1.48
VPS38Q05919 ADK2YER170W 678 nt5.83□□□□□ -1.48
VPS38Q05919 SOH1YGL127C 384 nt5.83□□□□□ -1.48
VPS38Q05919 YJL193WYJL193W 1209 nt5.83□□□□□ -1.48
VPS38Q05919 RHO4YKR055W 876 nt5.83□□□□□ -1.48
VPS38Q05919 SNO4YMR322C 714 nt5.83□□□□□ -1.48
VPS38Q05919 LEM3YNL323W 1245 nt5.83□□□□□ -1.48
VPS38Q05919 ODC2YOR222W 924 nt5.83□□□□□ -1.48
VPS38Q05919 RDL1YOR285W 420 nt5.83□□□□□ -1.48
VPS38Q05919 HSP33YOR391C 714 nt5.83□□□□□ -1.48
VPS38Q05919 CWC27YPL064C 906 nt5.83□□□□□ -1.48
VPS38Q05919 HSP32YPL280W 714 nt5.83□□□□□ -1.48
VPS38Q05919 STE50YCL032W 1041 nt5.83□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms