Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H1AQ02539 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H1AQ02539 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HIST1H1AQ02539 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H1AQ02539 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1AQ02539 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.79■□□□□ 0.44
HIST1H1AQ02539 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.79■□□□□ 0.44
HIST1H1AQ02539 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1AQ02539 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H1AQ02539 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1AQ02539 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1AQ02539 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1AQ02539 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H1AQ02539 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
HIST1H1AQ02539 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 AP003733.4-201ENST00000623785 1697 ntBASIC17.78■□□□□ 0.44
HIST1H1AQ02539 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 AC093536.1-201ENST00000569153 554 ntBASIC17.78■□□□□ 0.44
HIST1H1AQ02539 MIR4449-201ENST00000578365 66 ntBASIC17.78■□□□□ 0.44
HIST1H1AQ02539 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H1AQ02539 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1AQ02539 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H1AQ02539 GPX1-201ENST00000419349 1106 ntBASIC17.77■□□□□ 0.44
HIST1H1AQ02539 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST1H1AQ02539 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1AQ02539 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1AQ02539 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1AQ02539 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1AQ02539 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1AQ02539 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1AQ02539 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST1H1AQ02539 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H1AQ02539 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HIST1H1AQ02539 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 AC007029.1-201ENST00000604183 313 ntBASIC17.75■□□□□ 0.43
HIST1H1AQ02539 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H1AQ02539 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H1AQ02539 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H1AQ02539 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H1AQ02539 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H1AQ02539 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H1AQ02539 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.73■□□□□ 0.43
HIST1H1AQ02539 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.73■□□□□ 0.43
HIST1H1AQ02539 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.73■□□□□ 0.43
HIST1H1AQ02539 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HIST1H1AQ02539 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H1AQ02539 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H1AQ02539 SLC6A10P-202ENST00000431994 2058 ntBASIC17.71■□□□□ 0.43
HIST1H1AQ02539 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms