Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NKX6-1P78426 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.55■□□□□ 0.88
NKX6-1P78426 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NKX6-1P78426 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.55■□□□□ 0.88
NKX6-1P78426 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.55■□□□□ 0.88
NKX6-1P78426 KRT16P3-201ENST00000439127 1283 ntBASIC20.55■□□□□ 0.88
NKX6-1P78426 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.55■□□□□ 0.88
NKX6-1P78426 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NKX6-1P78426 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NKX6-1P78426 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NKX6-1P78426 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NKX6-1P78426 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.55■□□□□ 0.88
NKX6-1P78426 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NKX6-1P78426 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NKX6-1P78426 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NKX6-1P78426 AC010501.1-201ENST00000606270 1962 ntBASIC20.54■□□□□ 0.88
NKX6-1P78426 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NKX6-1P78426 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NKX6-1P78426 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NKX6-1P78426 AC096887.2-201ENST00000623443 1957 ntBASIC20.54■□□□□ 0.88
NKX6-1P78426 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX6-1P78426 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX6-1P78426 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX6-1P78426 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NKX6-1P78426 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX6-1P78426 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NKX6-1P78426 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NKX6-1P78426 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NKX6-1P78426 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NKX6-1P78426 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX6-1P78426 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.53■□□□□ 0.88
NKX6-1P78426 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX6-1P78426 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.52■□□□□ 0.88
NKX6-1P78426 UNC93B8-201ENST00000511903 705 ntBASIC20.52■□□□□ 0.88
NKX6-1P78426 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX6-1P78426 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NKX6-1P78426 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
NKX6-1P78426 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX6-1P78426 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX6-1P78426 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NKX6-1P78426 AC022616.5-201ENST00000518796 181 ntBASIC20.51■□□□□ 0.87
NKX6-1P78426 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.51■□□□□ 0.87
NKX6-1P78426 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.51■□□□□ 0.87
NKX6-1P78426 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX6-1P78426 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX6-1P78426 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
NKX6-1P78426 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NKX6-1P78426 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NKX6-1P78426 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NKX6-1P78426 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NKX6-1P78426 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NKX6-1P78426 MIR638-201ENST00000385237 100 ntBASIC20.5■□□□□ 0.87
NKX6-1P78426 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.5■□□□□ 0.87
NKX6-1P78426 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
NKX6-1P78426 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.5■□□□□ 0.87
NKX6-1P78426 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NKX6-1P78426 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.5■□□□□ 0.87
NKX6-1P78426 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NKX6-1P78426 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.49■□□□□ 0.87
NKX6-1P78426 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NKX6-1P78426 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NKX6-1P78426 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.49■□□□□ 0.87
NKX6-1P78426 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.49■□□□□ 0.87
NKX6-1P78426 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.49■□□□□ 0.87
NKX6-1P78426 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NKX6-1P78426 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NKX6-1P78426 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NKX6-1P78426 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NKX6-1P78426 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.48■□□□□ 0.87
NKX6-1P78426 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.48■□□□□ 0.87
NKX6-1P78426 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.47■□□□□ 0.87
NKX6-1P78426 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NKX6-1P78426 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NKX6-1P78426 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.47■□□□□ 0.87
NKX6-1P78426 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX6-1P78426 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX6-1P78426 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.47■□□□□ 0.87
NKX6-1P78426 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NKX6-1P78426 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
NKX6-1P78426 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX6-1P78426 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX6-1P78426 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NKX6-1P78426 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX6-1P78426 TSPY9P-201ENST00000440215 945 ntBASIC20.46■□□□□ 0.87
NKX6-1P78426 TSPY11P-201ENST00000442607 1045 ntBASIC20.46■□□□□ 0.87
NKX6-1P78426 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX6-1P78426 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NKX6-1P78426 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NKX6-1P78426 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
NKX6-1P78426 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-1P78426 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-1P78426 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-1P78426 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-1P78426 DUSP8P4-201ENST00000399538 1761 ntBASIC20.45■□□□□ 0.86
NKX6-1P78426 AC091060.1-201ENST00000623524 1766 ntBASIC20.45■□□□□ 0.86
NKX6-1P78426 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-1P78426 AL139246.5-201ENST00000606645 996 ntBASIC20.45■□□□□ 0.86
NKX6-1P78426 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NKX6-1P78426 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NKX6-1P78426 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms