Protein–RNA interactions for Protein: P53064

RTF1, RNA polymerase-associated protein RTF1, yeastyeast

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTF1P53064 tG(GCC)G1tG(GCC)G1 71 nt8.34□□□□□ -1.07
RTF1P53064 tG(GCC)G2tG(GCC)G2 71 nt8.34□□□□□ -1.07
RTF1P53064 tG(GCC)J1tG(GCC)J1 71 nt8.34□□□□□ -1.07
RTF1P53064 SUF23tG(GCC)J2 71 nt8.34□□□□□ -1.07
RTF1P53064 tG(GCC)MtG(GCC)M 71 nt8.34□□□□□ -1.07
RTF1P53064 tG(GCC)O1tG(GCC)O1 71 nt8.34□□□□□ -1.07
RTF1P53064 SUF17tG(GCC)O2 71 nt8.34□□□□□ -1.07
RTF1P53064 tG(GCC)P1tG(GCC)P1 71 nt8.34□□□□□ -1.07
RTF1P53064 tG(GCC)P2tG(GCC)P2 71 nt8.34□□□□□ -1.07
RTF1P53064 PAN5YHR063C 1140 nt8.34□□□□□ -1.07
RTF1P53064 ROT1YMR200W 771 nt8.34□□□□□ -1.07
RTF1P53064 BSC4YNL269W 396 nt8.34□□□□□ -1.07
RTF1P53064 RPS28AYOR167C 204 nt8.34□□□□□ -1.07
RTF1P53064 YDR034C-CYDR034C-C 1317 nt8.33□□□□□ -1.08
RTF1P53064 YLR410W-AYLR410W-A 1317 nt8.33□□□□□ -1.08
RTF1P53064 ERG1YGR175C 1491 nt8.33□□□□□ -1.08
RTF1P53064 ECM10YEL030W 1935 nt8.33□□□□□ -1.08
RTF1P53064 ARE2YNR019W 1929 nt8.33□□□□□ -1.08
RTF1P53064 YEL028WYEL028W 462 nt8.33□□□□□ -1.08
RTF1P53064 COG2YGR120C 789 nt8.33□□□□□ -1.08
RTF1P53064 CLC1YGR167W 702 nt8.33□□□□□ -1.08
RTF1P53064 RSM26YJR101W 801 nt8.33□□□□□ -1.08
RTF1P53064 MCH2YKL221W 1422 nt8.33□□□□□ -1.08
RTF1P53064 PSR1YLL010C 1284 nt8.33□□□□□ -1.08
RTF1P53064 PSR2YLR019W 1194 nt8.33□□□□□ -1.08
RTF1P53064 OGG1YML060W 1131 nt8.33□□□□□ -1.08
RTF1P53064 KSH1YNL024C-A 219 nt8.33□□□□□ -1.08
RTF1P53064 ADH5YBR145W 1056 nt8.33□□□□□ -1.08
RTF1P53064 LDB17YDL146W 1476 nt8.32□□□□□ -1.08
RTF1P53064 TEC1YBR083W 1461 nt8.32□□□□□ -1.08
RTF1P53064 RGD2YFL047W 2145 nt8.32□□□□□ -1.08
RTF1P53064 ERS1YCR075C 783 nt8.32□□□□□ -1.08
RTF1P53064 GIC2YDR309C 1152 nt8.32□□□□□ -1.08
RTF1P53064 YGL177WYGL177W 348 nt8.32□□□□□ -1.08
RTF1P53064 TFA2YKR062W 987 nt8.32□□□□□ -1.08
RTF1P53064 YMR245WYMR245W 621 nt8.32□□□□□ -1.08
RTF1P53064 YBR013CYBR013C 390 nt8.32□□□□□ -1.08
RTF1P53064 RAV2YDR202C 1056 nt8.31□□□□□ -1.08
RTF1P53064 MMM1YLL006W 1281 nt8.31□□□□□ -1.08
RTF1P53064 YOL106WYOL106W 354 nt8.31□□□□□ -1.08
RTF1P53064 IPP1YBR011C 864 nt8.31□□□□□ -1.08
RTF1P53064 HBN1YCL026C-B 582 nt8.31□□□□□ -1.08
RTF1P53064 YDR514CYDR514C 1452 nt8.31□□□□□ -1.08
RTF1P53064 EDE1YBL047C 4146 nt8.31□□□□□ -1.08
RTF1P53064 TIM22YDL217C 624 nt8.3□□□□□ -1.08
RTF1P53064 CBS2YDR197W 1170 nt8.3□□□□□ -1.08
RTF1P53064 YHR175W-AYHR175W-A 150 nt8.3□□□□□ -1.08
RTF1P53064 MIA40YKL195W 1212 nt8.3□□□□□ -1.08
RTF1P53064 DFR1YOR236W 636 nt8.3□□□□□ -1.08
RTF1P53064 YPL250W-AYPL250W-A 288 nt8.3□□□□□ -1.08
RTF1P53064 YLR345WYLR345W 1530 nt8.29□□□□□ -1.08
RTF1P53064 BUD9YGR041W 1644 nt8.29□□□□□ -1.08
RTF1P53064 GGC1YDL198C 903 nt8.29□□□□□ -1.08
RTF1P53064 DCV1YFR012W 609 nt8.29□□□□□ -1.08
RTF1P53064 NCS6YGL211W 1080 nt8.29□□□□□ -1.08
RTF1P53064 YHL018WYHL018W 363 nt8.29□□□□□ -1.08
RTF1P53064 ARD1YHR013C 717 nt8.29□□□□□ -1.08
RTF1P53064 IMP3YHR148W 552 nt8.29□□□□□ -1.08
RTF1P53064 IST3YIR005W 447 nt8.29□□□□□ -1.08
RTF1P53064 CMS1YLR003C 876 nt8.29□□□□□ -1.08
RTF1P53064 AAT2YLR027C 1257 nt8.29□□□□□ -1.08
RTF1P53064 ZRT2YLR130C 1269 nt8.29□□□□□ -1.08
RTF1P53064 FPR3YML074C 1236 nt8.29□□□□□ -1.08
RTF1P53064 RVB2YPL235W 1416 nt8.29□□□□□ -1.08
RTF1P53064 PMT2YAL023C 2280 nt8.28□□□□□ -1.08
RTF1P53064 TRS23YDR246W 660 nt8.28□□□□□ -1.08
RTF1P53064 RTT103YDR289C 1230 nt8.28□□□□□ -1.08
RTF1P53064 IRC9YJL142C 393 nt8.28□□□□□ -1.08
RTF1P53064 MOG1YJR074W 657 nt8.28□□□□□ -1.08
RTF1P53064 YLR194CYLR194C 765 nt8.28□□□□□ -1.08
RTF1P53064 YBL036CYBL036C 774 nt8.28□□□□□ -1.08
RTF1P53064 RRT1YBL048W 312 nt8.28□□□□□ -1.08
RTF1P53064 GTO3YMR251W 1101 nt8.28□□□□□ -1.08
RTF1P53064 LDH1YBR204C 1128 nt8.28□□□□□ -1.08
RTF1P53064 YGR054WYGR054W 1929 nt8.28□□□□□ -1.08
RTF1P53064 YBR241CYBR241C 1467 nt8.27□□□□□ -1.09
RTF1P53064 RPB4YJL140W 666 nt8.27□□□□□ -1.09
RTF1P53064 MDE1YJR024C 735 nt8.27□□□□□ -1.09
RTF1P53064 REX4YOL080C 870 nt8.27□□□□□ -1.09
RTF1P53064 GRX5YPL059W 453 nt8.27□□□□□ -1.09
RTF1P53064 AFG2YLR397C 2343 nt8.27□□□□□ -1.09
RTF1P53064 SDH4YDR178W 546 nt8.26□□□□□ -1.09
RTF1P53064 SEC72YLR292C 582 nt8.26□□□□□ -1.09
RTF1P53064 MRPS17YMR188C 714 nt8.26□□□□□ -1.09
RTF1P53064 MED8YBR193C 672 nt8.26□□□□□ -1.09
RTF1P53064 NDE1YMR145C 1683 nt8.25□□□□□ -1.09
RTF1P53064 GTT1YIR038C 705 nt8.25□□□□□ -1.09
RTF1P53064 LAC1YKL008C 1257 nt8.25□□□□□ -1.09
RTF1P53064 GCN3YKR026C 918 nt8.25□□□□□ -1.09
RTF1P53064 RRT7YLL030C 342 nt8.25□□□□□ -1.09
RTF1P53064 PRE7YBL041W 726 nt8.25□□□□□ -1.09
RTF1P53064 YMR253CYMR253C 1245 nt8.25□□□□□ -1.09
RTF1P53064 YOR024WYOR024W 324 nt8.25□□□□□ -1.09
RTF1P53064 SFG1YOR315W 1041 nt8.25□□□□□ -1.09
RTF1P53064 LDB16YCL005W 771 nt8.25□□□□□ -1.09
RTF1P53064 PEX3YDR329C 1326 nt8.25□□□□□ -1.09
RTF1P53064 TFC7YOR110W 1308 nt8.25□□□□□ -1.09
RTF1P53064 TAH11YJR046W 1815 nt8.24□□□□□ -1.09
RTF1P53064 IVY1YDR229W 1362 nt8.24□□□□□ -1.09
RTF1P53064 LPL1YOR059C 1353 nt8.24□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms