Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF144AP50876 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF144AP50876 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RNF144AP50876 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF144AP50876 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF144AP50876 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.7■■□□□ 1.07
RNF144AP50876 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF144AP50876 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF144AP50876 AC004987.1-201ENST00000428627 508 ntBASIC21.7■■□□□ 1.06
RNF144AP50876 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF144AP50876 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF144AP50876 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RNF144AP50876 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RNF144AP50876 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF144AP50876 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
RNF144AP50876 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF144AP50876 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF144AP50876 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF144AP50876 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF144AP50876 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF144AP50876 FOXO3B-201ENST00000395675 1928 ntBASIC21.68■■□□□ 1.06
RNF144AP50876 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF144AP50876 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF144AP50876 AL139125.2-201ENST00000623134 1869 ntBASIC21.68■■□□□ 1.06
RNF144AP50876 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF144AP50876 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF144AP50876 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF144AP50876 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF144AP50876 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF144AP50876 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF144AP50876 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF144AP50876 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RNF144AP50876 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF144AP50876 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF144AP50876 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF144AP50876 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF144AP50876 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF144AP50876 ATP5G2P3-201ENST00000429083 425 ntBASIC21.66■■□□□ 1.06
RNF144AP50876 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF144AP50876 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF144AP50876 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF144AP50876 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF144AP50876 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF144AP50876 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
RNF144AP50876 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF144AP50876 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF144AP50876 AL033527.3-201ENST00000566366 1196 ntBASIC21.65■■□□□ 1.06
RNF144AP50876 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF144AP50876 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF144AP50876 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF144AP50876 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF144AP50876 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF144AP50876 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RNF144AP50876 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.64■■□□□ 1.06
RNF144AP50876 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF144AP50876 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF144AP50876 AC087393.1-201ENST00000582896 145 ntBASIC21.64■■□□□ 1.05
RNF144AP50876 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF144AP50876 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RNF144AP50876 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF144AP50876 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RNF144AP50876 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF144AP50876 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.63■■□□□ 1.05
RNF144AP50876 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF144AP50876 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF144AP50876 LINC01124-201ENST00000409786 2117 ntBASIC21.63■■□□□ 1.05
RNF144AP50876 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF144AP50876 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
RNF144AP50876 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF144AP50876 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF144AP50876 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF144AP50876 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF144AP50876 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF144AP50876 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF144AP50876 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF144AP50876 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF144AP50876 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF144AP50876 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RNF144AP50876 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF144AP50876 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF144AP50876 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF144AP50876 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF144AP50876 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF144AP50876 AC139795.1-202ENST00000500444 432 ntBASIC21.61■■□□□ 1.05
RNF144AP50876 BHLHE23-202ENST00000612929 1109 ntBASIC21.61■■□□□ 1.05
RNF144AP50876 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF144AP50876 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF144AP50876 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF144AP50876 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF144AP50876 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF144AP50876 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF144AP50876 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF144AP50876 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF144AP50876 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RNF144AP50876 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF144AP50876 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF144AP50876 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF144AP50876 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF144AP50876 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF144AP50876 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms