Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
SLC6A11P48066 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SLC6A11P48066 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
SLC6A11P48066 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
SLC6A11P48066 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SLC6A11P48066 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.07■■□□□ 1.44
SLC6A11P48066 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SLC6A11P48066 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.07■■□□□ 1.44
SLC6A11P48066 AC131281.2-201ENST00000520478 145 ntBASIC24.07■■□□□ 1.44
SLC6A11P48066 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.07■■□□□ 1.44
SLC6A11P48066 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.07■■□□□ 1.44
SLC6A11P48066 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.07■■□□□ 1.44
SLC6A11P48066 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SLC6A11P48066 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.07■■□□□ 1.44
SLC6A11P48066 AC097639.1-201ENST00000565519 1891 ntBASIC24.07■■□□□ 1.44
SLC6A11P48066 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SLC6A11P48066 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SLC6A11P48066 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.06■■□□□ 1.44
SLC6A11P48066 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.06■■□□□ 1.44
SLC6A11P48066 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A11P48066 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A11P48066 MIR6724-1-201ENST00000616420 92 ntBASIC24.06■■□□□ 1.44
SLC6A11P48066 MIR6724-2-201ENST00000616483 92 ntBASIC24.06■■□□□ 1.44
SLC6A11P48066 MIR6724-4-201ENST00000617390 92 ntBASIC24.06■■□□□ 1.44
SLC6A11P48066 MIR6724-3-201ENST00000622482 92 ntBASIC24.06■■□□□ 1.44
SLC6A11P48066 AL117332.1-201ENST00000622628 974 ntBASIC24.06■■□□□ 1.44
SLC6A11P48066 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A11P48066 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A11P48066 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A11P48066 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
SLC6A11P48066 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.05■■□□□ 1.44
SLC6A11P48066 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.05■■□□□ 1.44
SLC6A11P48066 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.05■■□□□ 1.44
SLC6A11P48066 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
SLC6A11P48066 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.04■■□□□ 1.44
SLC6A11P48066 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.04■■□□□ 1.44
SLC6A11P48066 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SLC6A11P48066 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A11P48066 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A11P48066 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A11P48066 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.03■■□□□ 1.44
SLC6A11P48066 AC090877.2-201ENST00000558441 1738 ntBASIC24.03■■□□□ 1.44
SLC6A11P48066 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A11P48066 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A11P48066 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
SLC6A11P48066 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC6A11P48066 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.02■■□□□ 1.44
SLC6A11P48066 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.02■■□□□ 1.44
SLC6A11P48066 MIR3621-201ENST00000580529 85 ntBASIC24.02■■□□□ 1.44
SLC6A11P48066 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC6A11P48066 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.02■■□□□ 1.44
SLC6A11P48066 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC6A11P48066 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.02■■□□□ 1.44
SLC6A11P48066 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.01■■□□□ 1.43
SLC6A11P48066 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.01■■□□□ 1.43
SLC6A11P48066 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.01■■□□□ 1.43
SLC6A11P48066 AC010501.1-201ENST00000606270 1962 ntBASIC24.01■■□□□ 1.43
SLC6A11P48066 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SLC6A11P48066 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC6A11P48066 AL121749.1-202ENST00000609313 2153 ntBASIC24.01■■□□□ 1.43
SLC6A11P48066 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24■■□□□ 1.43
SLC6A11P48066 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24■■□□□ 1.43
SLC6A11P48066 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24■■□□□ 1.43
SLC6A11P48066 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SLC6A11P48066 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SLC6A11P48066 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.99■■□□□ 1.43
SLC6A11P48066 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A11P48066 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A11P48066 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.99■■□□□ 1.43
SLC6A11P48066 AL136116.3-201ENST00000402907 1138 ntBASIC23.99■■□□□ 1.43
SLC6A11P48066 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A11P48066 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
SLC6A11P48066 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A11P48066 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A11P48066 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A11P48066 AL356740.2-201ENST00000601559 647 ntBASIC23.98■■□□□ 1.43
SLC6A11P48066 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A11P48066 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A11P48066 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A11P48066 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A11P48066 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.98■■□□□ 1.43
SLC6A11P48066 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SLC6A11P48066 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SLC6A11P48066 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.97■■□□□ 1.43
SLC6A11P48066 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SLC6A11P48066 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.97■■□□□ 1.43
SLC6A11P48066 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.97■■□□□ 1.43
SLC6A11P48066 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.97■■□□□ 1.43
SLC6A11P48066 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
SLC6A11P48066 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SLC6A11P48066 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A11P48066 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A11P48066 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A11P48066 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A11P48066 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SLC6A11P48066 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.95■■□□□ 1.43
SLC6A11P48066 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
SLC6A11P48066 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.95■■□□□ 1.42
SLC6A11P48066 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.95■■□□□ 1.42
SLC6A11P48066 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms