Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 GEP5YLR091W 882 nt5.82□□□□□ -1.48
TDP1P38319 PCL1YNL289W 840 nt5.82□□□□□ -1.48
TDP1P38319 CWC27YPL064C 906 nt5.82□□□□□ -1.48
TDP1P38319 YPR196WYPR196W 1413 nt5.82□□□□□ -1.48
TDP1P38319 CHL4YDR254W 1377 nt5.81□□□□□ -1.48
TDP1P38319 YPL245WYPL245W 1365 nt5.81□□□□□ -1.48
TDP1P38319 GUA1YMR217W 1578 nt5.81□□□□□ -1.48
TDP1P38319 YDL129WYDL129W 876 nt5.81□□□□□ -1.48
TDP1P38319 AAT2YLR027C 1257 nt5.81□□□□□ -1.48
TDP1P38319 YLR361C-AYLR361C-A 297 nt5.81□□□□□ -1.48
TDP1P38319 RSF1YMR030W 1131 nt5.81□□□□□ -1.48
TDP1P38319 MRPS8YMR158W 468 nt5.81□□□□□ -1.48
TDP1P38319 YOL024WYOL024W 519 nt5.81□□□□□ -1.48
TDP1P38319 OSW1YOR255W 837 nt5.81□□□□□ -1.48
TDP1P38319 snR189snR189 189 nt5.81□□□□□ -1.48
TDP1P38319 YPR114WYPR114W 948 nt5.81□□□□□ -1.48
TDP1P38319 TAE1YBR261C 699 nt5.81□□□□□ -1.48
TDP1P38319 OSW2YLR054C 2175 nt5.81□□□□□ -1.48
TDP1P38319 RKM4YDR257C 1485 nt5.81□□□□□ -1.48
TDP1P38319 CRF1YDR223W 1404 nt5.81□□□□□ -1.48
TDP1P38319 GEX1YCL073C 1848 nt5.81□□□□□ -1.48
TDP1P38319 GEX2YKR106W 1848 nt5.81□□□□□ -1.48
TDP1P38319 HER2YMR293C 1395 nt5.8□□□□□ -1.48
TDP1P38319 GIT1YCR098C 1557 nt5.8□□□□□ -1.48
TDP1P38319 ARH1YDR376W 1482 nt5.8□□□□□ -1.48
TDP1P38319 RAM1YDL090C 1296 nt5.8□□□□□ -1.48
TDP1P38319 YDL241WYDL241W 372 nt5.8□□□□□ -1.48
TDP1P38319 RTN1YDR233C 888 nt5.8□□□□□ -1.48
TDP1P38319 BUD16YEL029C 939 nt5.8□□□□□ -1.48
TDP1P38319 VPS24YKL041W 675 nt5.8□□□□□ -1.48
TDP1P38319 VTA1YLR181C 993 nt5.8□□□□□ -1.48
TDP1P38319 FAR3YMR052W 615 nt5.8□□□□□ -1.48
TDP1P38319 SCP1YOR367W 603 nt5.8□□□□□ -1.48
TDP1P38319 FYV1YDR024W 486 nt5.79□□□□□ -1.48
TDP1P38319 HAT2YEL056W 1206 nt5.79□□□□□ -1.48
TDP1P38319 YEL075W-AYEL075W-A 612 nt5.79□□□□□ -1.48
TDP1P38319 SPC42YKL042W 1092 nt5.79□□□□□ -1.48
TDP1P38319 PML1YLR016C 615 nt5.79□□□□□ -1.48
TDP1P38319 YLR285C-AYLR285C-A 171 nt5.79□□□□□ -1.48
TDP1P38319 YLR463CYLR463C 552 nt5.79□□□□□ -1.48
TDP1P38319 DOM34YNL001W 1161 nt5.79□□□□□ -1.48
TDP1P38319 SSP2YOR242C 1116 nt5.79□□□□□ -1.48
TDP1P38319 RER1YCL001W 567 nt5.79□□□□□ -1.48
TDP1P38319 DUG1YFR044C 1446 nt5.79□□□□□ -1.48
TDP1P38319 RNR3YIL066C 2610 nt5.78□□□□□ -1.48
TDP1P38319 TRP5YGL026C 2124 nt5.78□□□□□ -1.48
TDP1P38319 YET3YDL072C 612 nt5.78□□□□□ -1.48
TDP1P38319 YGL072CYGL072C 360 nt5.78□□□□□ -1.48
TDP1P38319 RME1YGR044C 903 nt5.78□□□□□ -1.48
TDP1P38319 LDS1YAL018C 978 nt5.78□□□□□ -1.48
TDP1P38319 YJU3YKL094W 942 nt5.78□□□□□ -1.48
TDP1P38319 YKR073CYKR073C 321 nt5.78□□□□□ -1.48
TDP1P38319 ERV41YML067C 1059 nt5.78□□□□□ -1.48
TDP1P38319 FSF1YOR271C 984 nt5.78□□□□□ -1.48
TDP1P38319 MRPS16YPL013C 366 nt5.78□□□□□ -1.48
TDP1P38319 MPC54YOR177C 1395 nt5.78□□□□□ -1.48
TDP1P38319 MCM3YEL032W 2916 nt5.78□□□□□ -1.48
TDP1P38319 Q0142Q0142 177 nt5.77□□□□□ -1.49
TDP1P38319 SPO12YHR152W 522 nt5.77□□□□□ -1.49
TDP1P38319 ATP12YJL180C 978 nt5.77□□□□□ -1.49
TDP1P38319 CTR3YLR411W 726 nt5.77□□□□□ -1.49
TDP1P38319 CSI1YMR025W 888 nt5.77□□□□□ -1.49
TDP1P38319 YOL131WYOL131W 327 nt5.77□□□□□ -1.49
TDP1P38319 ALD6YPL061W 1503 nt5.77□□□□□ -1.49
TDP1P38319 YMR155WYMR155W 1644 nt5.77□□□□□ -1.49
TDP1P38319 CDC1YDR182W 1476 nt5.77□□□□□ -1.49
TDP1P38319 ATG4YNL223W 1485 nt5.77□□□□□ -1.49
TDP1P38319 PMT2YAL023C 2280 nt5.76□□□□□ -1.49
TDP1P38319 FAT3YKL187C 2253 nt5.76□□□□□ -1.49
TDP1P38319 ALT1YLR089C 1779 nt5.76□□□□□ -1.49
TDP1P38319 UPS3YDR185C 540 nt5.76□□□□□ -1.49
TDP1P38319 MCM6YGL201C 3054 nt5.76□□□□□ -1.49
TDP1P38319 LPL1YOR059C 1353 nt5.76□□□□□ -1.49
TDP1P38319 ERC1YHR032W 1746 nt5.76□□□□□ -1.49
TDP1P38319 RRP9YPR137W 1722 nt5.76□□□□□ -1.49
TDP1P38319 FET3YMR058W 1911 nt5.76□□□□□ -1.49
TDP1P38319 MGR3YMR115W 1506 nt5.75□□□□□ -1.49
TDP1P38319 HSP78YDR258C 2436 nt5.75□□□□□ -1.49
TDP1P38319 YIR007WYIR007W 2295 nt5.75□□□□□ -1.49
TDP1P38319 MAK31YCR020C-A 267 nt5.75□□□□□ -1.49
TDP1P38319 TIM22YDL217C 624 nt5.75□□□□□ -1.49
TDP1P38319 YDR034W-BYDR034W-B 156 nt5.75□□□□□ -1.49
TDP1P38319 YER138W-AYER138W-A 105 nt5.75□□□□□ -1.49
TDP1P38319 HAP2YGL237C 798 nt5.75□□□□□ -1.49
TDP1P38319 YMR075C-AYMR075C-A 366 nt5.75□□□□□ -1.49
TDP1P38319 MTF1YMR228W 1026 nt5.75□□□□□ -1.49
TDP1P38319 YBL107W-AYBL107W-A 105 nt5.75□□□□□ -1.49
TDP1P38319 YOR169CYOR169C 465 nt5.75□□□□□ -1.49
TDP1P38319 YDR132CYDR132C 1488 nt5.75□□□□□ -1.49
TDP1P38319 MMR1YLR190W 1476 nt5.75□□□□□ -1.49
TDP1P38319 PAF1YBR279W 1338 nt5.74□□□□□ -1.49
TDP1P38319 ARO9YHR137W 1542 nt5.74□□□□□ -1.49
TDP1P38319 DDC1YPL194W 1839 nt5.74□□□□□ -1.49
TDP1P38319 PKC1YBL105C 3456 nt5.74□□□□□ -1.49
TDP1P38319 PCL9YDL179W 915 nt5.74□□□□□ -1.49
TDP1P38319 PCL6YER059W 1263 nt5.74□□□□□ -1.49
TDP1P38319 YML018CYML018C 1182 nt5.74□□□□□ -1.49
TDP1P38319 BAG7YOR134W 1230 nt5.74□□□□□ -1.49
TDP1P38319 SUT2YPR009W 807 nt5.74□□□□□ -1.49
TDP1P38319 VMS1YDR049W 1899 nt5.74□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms