Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MIR4281-201ENST00000580852 62 ntBASIC19.87■□□□□ 0.77
COL8A2P25067 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.87■□□□□ 0.77
COL8A2P25067 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL8A2P25067 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL8A2P25067 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL8A2P25067 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.86■□□□□ 0.77
COL8A2P25067 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.86■□□□□ 0.77
COL8A2P25067 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
COL8A2P25067 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.86■□□□□ 0.77
COL8A2P25067 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.86■□□□□ 0.77
COL8A2P25067 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
COL8A2P25067 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL8A2P25067 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL8A2P25067 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL8A2P25067 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL8A2P25067 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.85■□□□□ 0.77
COL8A2P25067 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.85■□□□□ 0.77
COL8A2P25067 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COL8A2P25067 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.85■□□□□ 0.77
COL8A2P25067 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.85■□□□□ 0.77
COL8A2P25067 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL8A2P25067 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL8A2P25067 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL8A2P25067 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL8A2P25067 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL8A2P25067 AL356441.2-201ENST00000443009 864 ntBASIC19.84■□□□□ 0.77
COL8A2P25067 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.84■□□□□ 0.77
COL8A2P25067 AC131212.1-201ENST00000613771 668 ntBASIC19.84■□□□□ 0.77
COL8A2P25067 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
COL8A2P25067 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.84■□□□□ 0.77
COL8A2P25067 AC021242.3-201ENST00000607598 1377 ntBASIC19.83■□□□□ 0.77
COL8A2P25067 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL8A2P25067 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL8A2P25067 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.83■□□□□ 0.77
COL8A2P25067 AC011551.1-201ENST00000614101 683 ntBASIC19.83■□□□□ 0.77
COL8A2P25067 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
COL8A2P25067 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL8A2P25067 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL8A2P25067 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.83■□□□□ 0.76
COL8A2P25067 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL8A2P25067 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.83■□□□□ 0.76
COL8A2P25067 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL8A2P25067 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL8A2P25067 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL8A2P25067 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.82■□□□□ 0.76
COL8A2P25067 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.82■□□□□ 0.76
COL8A2P25067 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COL8A2P25067 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL8A2P25067 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL8A2P25067 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL8A2P25067 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL8A2P25067 AC091060.1-201ENST00000623524 1766 ntBASIC19.81■□□□□ 0.76
COL8A2P25067 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL8A2P25067 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COL8A2P25067 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL8A2P25067 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL8A2P25067 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COL8A2P25067 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL8A2P25067 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL8A2P25067 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.8■□□□□ 0.76
COL8A2P25067 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL8A2P25067 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL8A2P25067 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.8■□□□□ 0.76
COL8A2P25067 UNC93B8-201ENST00000511903 705 ntBASIC19.8■□□□□ 0.76
COL8A2P25067 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.8■□□□□ 0.76
COL8A2P25067 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL8A2P25067 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL8A2P25067 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.8■□□□□ 0.76
COL8A2P25067 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL8A2P25067 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL8A2P25067 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.79■□□□□ 0.76
COL8A2P25067 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL8A2P25067 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.79■□□□□ 0.76
COL8A2P25067 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL8A2P25067 TSPY9P-201ENST00000440215 945 ntBASIC19.78■□□□□ 0.76
COL8A2P25067 TSPY11P-201ENST00000442607 1045 ntBASIC19.78■□□□□ 0.76
COL8A2P25067 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.78■□□□□ 0.76
COL8A2P25067 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL8A2P25067 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.78■□□□□ 0.76
COL8A2P25067 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL8A2P25067 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL8A2P25067 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL8A2P25067 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL8A2P25067 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL8A2P25067 DUSP8P4-201ENST00000399538 1761 ntBASIC19.78■□□□□ 0.76
COL8A2P25067 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL8A2P25067 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.77■□□□□ 0.76
COL8A2P25067 AC092028.1-203ENST00000608262 953 ntBASIC19.77■□□□□ 0.76
COL8A2P25067 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.77■□□□□ 0.76
COL8A2P25067 AC090877.2-201ENST00000558441 1738 ntBASIC19.76■□□□□ 0.75
COL8A2P25067 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL8A2P25067 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL8A2P25067 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL8A2P25067 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.76■□□□□ 0.75
COL8A2P25067 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL8A2P25067 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL8A2P25067 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.76■□□□□ 0.75
COL8A2P25067 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.76■□□□□ 0.75
COL8A2P25067 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL8A2P25067 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms