Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
KCNA3P22001 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
KCNA3P22001 AP001330.3-201ENST00000520123 633 ntBASIC29.35■■■□□ 2.29
KCNA3P22001 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC29.35■■■□□ 2.29
KCNA3P22001 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC29.35■■■□□ 2.29
KCNA3P22001 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
KCNA3P22001 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
KCNA3P22001 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
KCNA3P22001 PLD4-205ENST00000553861 667 ntTSL 2 BASIC29.34■■■□□ 2.29
KCNA3P22001 ABCB10P1-201ENST00000614297 2181 ntBASIC29.33■■■□□ 2.29
KCNA3P22001 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC29.33■■■□□ 2.29
KCNA3P22001 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
KCNA3P22001 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
KCNA3P22001 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.32■■■□□ 2.28
KCNA3P22001 GLI3-203ENST00000437480 451 ntTSL 2 BASIC29.32■■■□□ 2.28
KCNA3P22001 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
KCNA3P22001 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
KCNA3P22001 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
KCNA3P22001 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
KCNA3P22001 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
KCNA3P22001 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC29.31■■■□□ 2.28
KCNA3P22001 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
KCNA3P22001 DRD5P2-201ENST00000421395 2012 ntBASIC29.31■■■□□ 2.28
KCNA3P22001 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
KCNA3P22001 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.3■■■□□ 2.28
KCNA3P22001 GATM-206ENST00000558336 1522 ntTSL 2 BASIC29.3■■■□□ 2.28
KCNA3P22001 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
KCNA3P22001 LINC01003-201ENST00000564834 1764 ntBASIC29.29■■■□□ 2.28
KCNA3P22001 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
KCNA3P22001 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
KCNA3P22001 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
KCNA3P22001 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
KCNA3P22001 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
KCNA3P22001 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
KCNA3P22001 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
KCNA3P22001 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
KCNA3P22001 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNA3P22001 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
KCNA3P22001 AC091305.1-201ENST00000479476 895 ntBASIC29.27■■■□□ 2.28
KCNA3P22001 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
KCNA3P22001 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
KCNA3P22001 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
KCNA3P22001 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
KCNA3P22001 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
KCNA3P22001 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.26■■■□□ 2.27
KCNA3P22001 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
KCNA3P22001 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
KCNA3P22001 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
KCNA3P22001 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
KCNA3P22001 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
KCNA3P22001 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KCNA3P22001 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
KCNA3P22001 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC29.24■■■□□ 2.27
KCNA3P22001 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KCNA3P22001 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KCNA3P22001 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
KCNA3P22001 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KCNA3P22001 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
KCNA3P22001 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KCNA3P22001 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KCNA3P22001 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC29.23■■■□□ 2.27
KCNA3P22001 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC29.22■■■□□ 2.27
KCNA3P22001 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC29.22■■■□□ 2.27
KCNA3P22001 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.22■■■□□ 2.27
KCNA3P22001 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.22■■■□□ 2.27
KCNA3P22001 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.21■■■□□ 2.27
KCNA3P22001 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
KCNA3P22001 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.21■■■□□ 2.27
KCNA3P22001 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC29.2■■■□□ 2.26
KCNA3P22001 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC29.2■■■□□ 2.26
KCNA3P22001 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.2■■■□□ 2.26
KCNA3P22001 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
KCNA3P22001 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.2■■■□□ 2.26
KCNA3P22001 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
KCNA3P22001 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
KCNA3P22001 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
KCNA3P22001 CA15P2-201ENST00000611168 834 ntBASIC29.19■■■□□ 2.26
KCNA3P22001 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
KCNA3P22001 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
KCNA3P22001 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC29.18■■■□□ 2.26
KCNA3P22001 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
KCNA3P22001 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
KCNA3P22001 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC29.17■■■□□ 2.26
KCNA3P22001 AC090192.1-201ENST00000517740 490 ntBASIC29.17■■■□□ 2.26
KCNA3P22001 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.17■■■□□ 2.26
KCNA3P22001 MIR4767-201ENST00000582827 78 ntBASIC29.17■■■□□ 2.26
KCNA3P22001 RARRES2P11-201ENST00000635158 484 ntBASIC29.17■■■□□ 2.26
KCNA3P22001 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
KCNA3P22001 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
KCNA3P22001 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
KCNA3P22001 DUX4L19-201ENST00000557448 1267 ntBASIC29.16■■■□□ 2.26
KCNA3P22001 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC29.16■■■□□ 2.26
KCNA3P22001 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
KCNA3P22001 FOXO3B-201ENST00000395675 1928 ntBASIC29.16■■■□□ 2.26
KCNA3P22001 AC004448.1-201ENST00000458332 883 ntBASIC29.15■■■□□ 2.26
KCNA3P22001 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.15■■■□□ 2.26
KCNA3P22001 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
KCNA3P22001 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC29.15■■■□□ 2.26
KCNA3P22001 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.15■■■□□ 2.26
KCNA3P22001 RASA4CP-201ENST00000424092 1398 ntBASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms