Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TNFRSF1BP20333 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.79■■□□□ 1.08
TNFRSF1BP20333 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF1BP20333 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF1BP20333 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF1BP20333 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF1BP20333 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF1BP20333 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.78■■□□□ 1.08
TNFRSF1BP20333 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF1BP20333 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TNFRSF1BP20333 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.78■■□□□ 1.08
TNFRSF1BP20333 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF1BP20333 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF1BP20333 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF1BP20333 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TNFRSF1BP20333 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.77■■□□□ 1.08
TNFRSF1BP20333 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF1BP20333 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF1BP20333 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF1BP20333 AC093536.1-201ENST00000569153 554 ntBASIC21.77■■□□□ 1.08
TNFRSF1BP20333 AC022413.1-201ENST00000624602 984 ntBASIC21.77■■□□□ 1.08
TNFRSF1BP20333 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TNFRSF1BP20333 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.76■■□□□ 1.07
TNFRSF1BP20333 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TNFRSF1BP20333 MIR639-201ENST00000384974 98 ntBASIC21.76■■□□□ 1.07
TNFRSF1BP20333 RP9P-202ENST00000450133 1212 ntBASIC21.76■■□□□ 1.07
TNFRSF1BP20333 ABCB10P4-201ENST00000566803 2184 ntBASIC21.76■■□□□ 1.07
TNFRSF1BP20333 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.76■■□□□ 1.07
TNFRSF1BP20333 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TNFRSF1BP20333 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TNFRSF1BP20333 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.75■■□□□ 1.07
TNFRSF1BP20333 ECEL1P2-201ENST00000461596 1295 ntBASIC21.75■■□□□ 1.07
TNFRSF1BP20333 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TNFRSF1BP20333 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TNFRSF1BP20333 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.75■■□□□ 1.07
TNFRSF1BP20333 MIR6089-201ENST00000616698 64 ntBASIC21.75■■□□□ 1.07
TNFRSF1BP20333 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.75■■□□□ 1.07
TNFRSF1BP20333 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TNFRSF1BP20333 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TNFRSF1BP20333 AC141586.4-201ENST00000624558 1573 ntBASIC21.74■■□□□ 1.07
TNFRSF1BP20333 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
TNFRSF1BP20333 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFRSF1BP20333 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TNFRSF1BP20333 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.73■■□□□ 1.07
TNFRSF1BP20333 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.73■■□□□ 1.07
TNFRSF1BP20333 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TNFRSF1BP20333 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFRSF1BP20333 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
TNFRSF1BP20333 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNFRSF1BP20333 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFRSF1BP20333 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TNFRSF1BP20333 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF1BP20333 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.7■■□□□ 1.06
TNFRSF1BP20333 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.7■■□□□ 1.06
TNFRSF1BP20333 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFRSF1BP20333 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.7■■□□□ 1.06
TNFRSF1BP20333 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.7■■□□□ 1.06
TNFRSF1BP20333 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.7■■□□□ 1.06
TNFRSF1BP20333 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF1BP20333 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TNFRSF1BP20333 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TNFRSF1BP20333 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.69■■□□□ 1.06
TNFRSF1BP20333 HLA-L-211ENST00000482052 1765 ntBASIC21.69■■□□□ 1.06
TNFRSF1BP20333 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TNFRSF1BP20333 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFRSF1BP20333 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF1BP20333 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.68■■□□□ 1.06
TNFRSF1BP20333 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFRSF1BP20333 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.68■■□□□ 1.06
TNFRSF1BP20333 AC007029.1-201ENST00000604183 313 ntBASIC21.68■■□□□ 1.06
TNFRSF1BP20333 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFRSF1BP20333 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF1BP20333 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TNFRSF1BP20333 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms