Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.61■■□□□ 1.05
UBL4AP11441 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.61■■□□□ 1.05
UBL4AP11441 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.61■■□□□ 1.05
UBL4AP11441 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBL4AP11441 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBL4AP11441 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBL4AP11441 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBL4AP11441 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBL4AP11441 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.61■■□□□ 1.05
UBL4AP11441 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.61■■□□□ 1.05
UBL4AP11441 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBL4AP11441 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBL4AP11441 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBL4AP11441 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBL4AP11441 DUX4L18-201ENST00000553347 1267 ntBASIC21.6■■□□□ 1.05
UBL4AP11441 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
UBL4AP11441 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBL4AP11441 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBL4AP11441 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBL4AP11441 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBL4AP11441 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
UBL4AP11441 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.59■■□□□ 1.05
UBL4AP11441 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.59■■□□□ 1.05
UBL4AP11441 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.59■■□□□ 1.05
UBL4AP11441 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
UBL4AP11441 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBL4AP11441 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBL4AP11441 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBL4AP11441 ATP5G2P3-201ENST00000429083 425 ntBASIC21.58■■□□□ 1.05
UBL4AP11441 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.58■■□□□ 1.05
UBL4AP11441 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UBL4AP11441 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.58■■□□□ 1.05
UBL4AP11441 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBL4AP11441 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBL4AP11441 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBL4AP11441 AC004987.1-201ENST00000428627 508 ntBASIC21.57■■□□□ 1.04
UBL4AP11441 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
UBL4AP11441 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UBL4AP11441 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBL4AP11441 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBL4AP11441 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBL4AP11441 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBL4AP11441 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBL4AP11441 AC139795.1-202ENST00000500444 432 ntBASIC21.56■■□□□ 1.04
UBL4AP11441 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.56■■□□□ 1.04
UBL4AP11441 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBL4AP11441 AP003733.4-201ENST00000623785 1697 ntBASIC21.56■■□□□ 1.04
UBL4AP11441 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBL4AP11441 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBL4AP11441 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
UBL4AP11441 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.55■■□□□ 1.04
UBL4AP11441 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
UBL4AP11441 AC012354.3-201ENST00000623734 483 ntBASIC21.55■■□□□ 1.04
UBL4AP11441 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBL4AP11441 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBL4AP11441 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBL4AP11441 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
UBL4AP11441 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBL4AP11441 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBL4AP11441 TSPY13P-201ENST00000338964 914 ntBASIC21.54■■□□□ 1.04
UBL4AP11441 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.54■■□□□ 1.04
UBL4AP11441 MIR6089-201ENST00000616698 64 ntBASIC21.54■■□□□ 1.04
UBL4AP11441 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBL4AP11441 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
UBL4AP11441 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UBL4AP11441 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.54■■□□□ 1.04
UBL4AP11441 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBL4AP11441 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBL4AP11441 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.53■■□□□ 1.04
UBL4AP11441 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.53■■□□□ 1.04
UBL4AP11441 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
UBL4AP11441 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBL4AP11441 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBL4AP11441 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBL4AP11441 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBL4AP11441 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
UBL4AP11441 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBL4AP11441 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBL4AP11441 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBL4AP11441 LONRF2P2-201ENST00000439212 571 ntBASIC21.52■■□□□ 1.04
UBL4AP11441 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.52■■□□□ 1.04
UBL4AP11441 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBL4AP11441 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBL4AP11441 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
UBL4AP11441 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.51■■□□□ 1.03
UBL4AP11441 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.51■■□□□ 1.03
UBL4AP11441 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBL4AP11441 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.51■■□□□ 1.03
UBL4AP11441 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBL4AP11441 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBL4AP11441 BHLHE23-202ENST00000612929 1109 ntBASIC21.51■■□□□ 1.03
UBL4AP11441 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBL4AP11441 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
UBL4AP11441 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
UBL4AP11441 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBL4AP11441 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.5■■□□□ 1.03
UBL4AP11441 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.5■■□□□ 1.03
UBL4AP11441 AL592295.1-201ENST00000400984 884 ntBASIC21.5■■□□□ 1.03
UBL4AP11441 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBL4AP11441 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms