Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAB40ALP0C0E4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RAB40ALP0C0E4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.16■■□□□ 1.14
RAB40ALP0C0E4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.16■■□□□ 1.14
RAB40ALP0C0E4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAB40ALP0C0E4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.16■■□□□ 1.14
RAB40ALP0C0E4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAB40ALP0C0E4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAB40ALP0C0E4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAB40ALP0C0E4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAB40ALP0C0E4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB40ALP0C0E4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.15■■□□□ 1.14
RAB40ALP0C0E4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB40ALP0C0E4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB40ALP0C0E4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.15■■□□□ 1.14
RAB40ALP0C0E4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RAB40ALP0C0E4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RAB40ALP0C0E4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB40ALP0C0E4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB40ALP0C0E4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RAB40ALP0C0E4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RAB40ALP0C0E4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RAB40ALP0C0E4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAB40ALP0C0E4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.14■■□□□ 1.13
RAB40ALP0C0E4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.14■■□□□ 1.13
RAB40ALP0C0E4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.14■■□□□ 1.13
RAB40ALP0C0E4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RAB40ALP0C0E4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAB40ALP0C0E4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RAB40ALP0C0E4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAB40ALP0C0E4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.13■■□□□ 1.13
RAB40ALP0C0E4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RAB40ALP0C0E4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 AC010997.5-201ENST00000609182 354 ntBASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.12■■□□□ 1.13
RAB40ALP0C0E4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.11■■□□□ 1.13
RAB40ALP0C0E4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RAB40ALP0C0E4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RAB40ALP0C0E4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.11■■□□□ 1.13
RAB40ALP0C0E4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.11■■□□□ 1.13
RAB40ALP0C0E4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.11■■□□□ 1.13
RAB40ALP0C0E4 AC019069.1-201ENST00000610008 1333 ntBASIC22.1■■□□□ 1.13
RAB40ALP0C0E4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAB40ALP0C0E4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAB40ALP0C0E4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
RAB40ALP0C0E4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.1■■□□□ 1.13
RAB40ALP0C0E4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.1■■□□□ 1.13
RAB40ALP0C0E4 MTDHP2-201ENST00000601468 714 ntBASIC22.1■■□□□ 1.13
RAB40ALP0C0E4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAB40ALP0C0E4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAB40ALP0C0E4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 MIR6724-1-201ENST00000616420 92 ntBASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 MIR6724-2-201ENST00000616483 92 ntBASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 MIR6724-4-201ENST00000617390 92 ntBASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 MIR6724-3-201ENST00000622482 92 ntBASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RAB40ALP0C0E4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RAB40ALP0C0E4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RAB40ALP0C0E4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RAB40ALP0C0E4 AC097639.1-201ENST00000565519 1891 ntBASIC22.08■■□□□ 1.13
RAB40ALP0C0E4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RAB40ALP0C0E4 AF131216.4-201ENST00000638924 1588 ntBASIC22.08■■□□□ 1.12
RAB40ALP0C0E4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAB40ALP0C0E4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RAB40ALP0C0E4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAB40ALP0C0E4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.06■■□□□ 1.12
RAB40ALP0C0E4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.06■■□□□ 1.12
RAB40ALP0C0E4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RAB40ALP0C0E4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
RAB40ALP0C0E4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAB40ALP0C0E4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
RAB40ALP0C0E4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAB40ALP0C0E4 AC090877.2-201ENST00000558441 1738 ntBASIC22.06■■□□□ 1.12
RAB40ALP0C0E4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms