Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.99■□□□□ 0.95
MRPL3P09001 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRPL3P09001 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MRPL3P09001 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.98■□□□□ 0.95
MRPL3P09001 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRPL3P09001 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.98■□□□□ 0.95
MRPL3P09001 SMPD5-203ENST00000639008 1464 ntBASIC20.98■□□□□ 0.95
MRPL3P09001 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.98■□□□□ 0.95
MRPL3P09001 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.98■□□□□ 0.95
MRPL3P09001 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.98■□□□□ 0.95
MRPL3P09001 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MRPL3P09001 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
MRPL3P09001 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL3P09001 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL3P09001 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL3P09001 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL3P09001 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL3P09001 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL3P09001 AC141586.4-201ENST00000624558 1573 ntBASIC20.97■□□□□ 0.95
MRPL3P09001 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MRPL3P09001 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
MRPL3P09001 AC004812.2-201ENST00000611079 2094 ntBASIC20.97■□□□□ 0.95
MRPL3P09001 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.96■□□□□ 0.95
MRPL3P09001 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.96■□□□□ 0.95
MRPL3P09001 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.96■□□□□ 0.95
MRPL3P09001 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MRPL3P09001 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.95■□□□□ 0.94
MRPL3P09001 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
MRPL3P09001 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MRPL3P09001 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRPL3P09001 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MRPL3P09001 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MRPL3P09001 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.94■□□□□ 0.94
MRPL3P09001 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.94■□□□□ 0.94
MRPL3P09001 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.94■□□□□ 0.94
MRPL3P09001 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MRPL3P09001 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MRPL3P09001 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.93■□□□□ 0.94
MRPL3P09001 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRPL3P09001 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.93■□□□□ 0.94
MRPL3P09001 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.93■□□□□ 0.94
MRPL3P09001 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRPL3P09001 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.93■□□□□ 0.94
MRPL3P09001 ABCB10P4-201ENST00000566803 2184 ntBASIC20.93■□□□□ 0.94
MRPL3P09001 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRPL3P09001 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MRPL3P09001 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.92■□□□□ 0.94
MRPL3P09001 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MRPL3P09001 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.92■□□□□ 0.94
MRPL3P09001 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MRPL3P09001 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MRPL3P09001 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
MRPL3P09001 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MRPL3P09001 AC092296.2-201ENST00000589470 999 ntBASIC20.91■□□□□ 0.94
MRPL3P09001 MIR6089-201ENST00000616698 64 ntBASIC20.91■□□□□ 0.94
MRPL3P09001 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
MRPL3P09001 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.9■□□□□ 0.94
MRPL3P09001 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MRPL3P09001 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MRPL3P09001 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MRPL3P09001 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MRPL3P09001 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
MRPL3P09001 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
MRPL3P09001 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MRPL3P09001 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.89■□□□□ 0.93
MRPL3P09001 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.89■□□□□ 0.93
MRPL3P09001 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MRPL3P09001 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MRPL3P09001 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
MRPL3P09001 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MRPL3P09001 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MRPL3P09001 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MRPL3P09001 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MRPL3P09001 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.88■□□□□ 0.93
MRPL3P09001 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MRPL3P09001 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.87■□□□□ 0.93
MRPL3P09001 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MRPL3P09001 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms