Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.22■■■□□ 2.59
NEFMP07197 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.22■■■□□ 2.59
NEFMP07197 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NEFMP07197 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NEFMP07197 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
NEFMP07197 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
NEFMP07197 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NEFMP07197 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
NEFMP07197 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
NEFMP07197 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NEFMP07197 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NEFMP07197 AC120024.1-201ENST00000562672 995 ntBASIC31.21■■■□□ 2.59
NEFMP07197 AL035685.1-201ENST00000636663 812 ntBASIC31.21■■■□□ 2.59
NEFMP07197 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
NEFMP07197 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NEFMP07197 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
NEFMP07197 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NEFMP07197 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
NEFMP07197 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
NEFMP07197 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
NEFMP07197 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.19■■■□□ 2.58
NEFMP07197 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.19■■■□□ 2.58
NEFMP07197 AC011551.1-201ENST00000614101 683 ntBASIC31.19■■■□□ 2.58
NEFMP07197 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.19■■■□□ 2.58
NEFMP07197 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NEFMP07197 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
NEFMP07197 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.19■■■□□ 2.58
NEFMP07197 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NEFMP07197 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NEFMP07197 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
NEFMP07197 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NEFMP07197 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
NEFMP07197 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.17■■■□□ 2.58
NEFMP07197 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
NEFMP07197 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NEFMP07197 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NEFMP07197 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
NEFMP07197 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
NEFMP07197 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
NEFMP07197 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.15■■■□□ 2.58
NEFMP07197 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.15■■■□□ 2.58
NEFMP07197 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NEFMP07197 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.15■■■□□ 2.58
NEFMP07197 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.15■■■□□ 2.58
NEFMP07197 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.15■■■□□ 2.58
NEFMP07197 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.15■■■□□ 2.58
NEFMP07197 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
NEFMP07197 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
NEFMP07197 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.14■■■□□ 2.58
NEFMP07197 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
NEFMP07197 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
NEFMP07197 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
NEFMP07197 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NEFMP07197 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
NEFMP07197 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC31.14■■■□□ 2.57
NEFMP07197 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.13■■■□□ 2.57
NEFMP07197 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NEFMP07197 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NEFMP07197 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.13■■■□□ 2.57
NEFMP07197 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
NEFMP07197 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.13■■■□□ 2.57
NEFMP07197 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
NEFMP07197 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.13■■■□□ 2.57
NEFMP07197 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
NEFMP07197 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NEFMP07197 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
NEFMP07197 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
NEFMP07197 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.12■■■□□ 2.57
NEFMP07197 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
NEFMP07197 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.1■■■□□ 2.57
NEFMP07197 GAK-223ENST00000628912 497 ntTSL 5 BASIC31.1■■■□□ 2.57
NEFMP07197 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NEFMP07197 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
NEFMP07197 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NEFMP07197 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
NEFMP07197 BX664725.1-201ENST00000438252 379 ntBASIC31.09■■■□□ 2.57
NEFMP07197 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
NEFMP07197 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.08■■■□□ 2.57
NEFMP07197 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
NEFMP07197 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.08■■■□□ 2.57
NEFMP07197 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC31.08■■■□□ 2.57
NEFMP07197 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NEFMP07197 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
NEFMP07197 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.08■■■□□ 2.57
NEFMP07197 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
NEFMP07197 Z92544.1-202ENST00000571933 1220 ntBASIC31.07■■■□□ 2.56
NEFMP07197 MIR4281-201ENST00000580852 62 ntBASIC31.07■■■□□ 2.56
NEFMP07197 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
NEFMP07197 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.07■■■□□ 2.56
NEFMP07197 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NEFMP07197 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.06■■■□□ 2.56
NEFMP07197 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
NEFMP07197 AC090877.2-201ENST00000558441 1738 ntBASIC31.06■■■□□ 2.56
NEFMP07197 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
NEFMP07197 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NEFMP07197 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NEFMP07197 KRT125P-201ENST00000546827 989 ntBASIC31.05■■■□□ 2.56
NEFMP07197 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.05■■■□□ 2.56
NEFMP07197 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
NEFMP07197 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms