Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
COL5A2P05997 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
COL5A2P05997 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
COL5A2P05997 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC31.54■■■□□ 2.64
COL5A2P05997 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
COL5A2P05997 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.54■■■□□ 2.64
COL5A2P05997 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
COL5A2P05997 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.53■■■□□ 2.64
COL5A2P05997 MIR6722-201ENST00000617286 78 ntBASIC31.53■■■□□ 2.64
COL5A2P05997 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
COL5A2P05997 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.52■■■□□ 2.64
COL5A2P05997 AC104564.3-201ENST00000582367 638 ntBASIC31.52■■■□□ 2.64
COL5A2P05997 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC31.52■■■□□ 2.64
COL5A2P05997 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL5A2P05997 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
COL5A2P05997 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL5A2P05997 AC139426.1-201ENST00000568218 2529 ntBASIC31.52■■■□□ 2.64
COL5A2P05997 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL5A2P05997 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL5A2P05997 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
COL5A2P05997 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
COL5A2P05997 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.52■■■□□ 2.64
COL5A2P05997 FOXO3B-201ENST00000395675 1928 ntBASIC31.51■■■□□ 2.64
COL5A2P05997 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
COL5A2P05997 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
COL5A2P05997 EDA-201ENST00000338901 1233 ntBASIC31.49■■■□□ 2.63
COL5A2P05997 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.49■■■□□ 2.63
COL5A2P05997 AC024257.2-201ENST00000549699 147 ntBASIC31.49■■■□□ 2.63
COL5A2P05997 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.49■■■□□ 2.63
COL5A2P05997 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.49■■■□□ 2.63
COL5A2P05997 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL5A2P05997 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
COL5A2P05997 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL5A2P05997 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL5A2P05997 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
COL5A2P05997 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
COL5A2P05997 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
COL5A2P05997 MIR5787-201ENST00000611784 55 ntBASIC31.47■■■□□ 2.63
COL5A2P05997 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
COL5A2P05997 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.46■■■□□ 2.63
COL5A2P05997 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.46■■■□□ 2.63
COL5A2P05997 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.46■■■□□ 2.63
COL5A2P05997 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.46■■■□□ 2.63
COL5A2P05997 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
COL5A2P05997 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
COL5A2P05997 AC105265.2-201ENST00000467189 838 ntBASIC31.45■■■□□ 2.62
COL5A2P05997 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.45■■■□□ 2.62
COL5A2P05997 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
COL5A2P05997 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
COL5A2P05997 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.43■■■□□ 2.62
COL5A2P05997 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.43■■■□□ 2.62
COL5A2P05997 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
COL5A2P05997 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL5A2P05997 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
COL5A2P05997 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
COL5A2P05997 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
COL5A2P05997 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
COL5A2P05997 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
COL5A2P05997 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.41■■■□□ 2.62
COL5A2P05997 AL355001.2-201ENST00000620617 1191 ntBASIC31.41■■■□□ 2.62
COL5A2P05997 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL5A2P05997 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL5A2P05997 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
COL5A2P05997 SRD5A1P1-201ENST00000442297 786 ntBASIC31.4■■■□□ 2.62
COL5A2P05997 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.4■■■□□ 2.62
COL5A2P05997 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
COL5A2P05997 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL5A2P05997 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.4■■■□□ 2.62
COL5A2P05997 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
COL5A2P05997 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
COL5A2P05997 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
COL5A2P05997 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
COL5A2P05997 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC31.39■■■□□ 2.62
COL5A2P05997 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.39■■■□□ 2.62
COL5A2P05997 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
COL5A2P05997 AP001330.3-201ENST00000520123 633 ntBASIC31.39■■■□□ 2.62
COL5A2P05997 AF213884.3-201ENST00000563833 479 ntBASIC31.39■■■□□ 2.62
COL5A2P05997 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.39■■■□□ 2.62
COL5A2P05997 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
COL5A2P05997 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.38■■■□□ 2.61
COL5A2P05997 MIR939-201ENST00000401314 82 ntBASIC31.38■■■□□ 2.61
COL5A2P05997 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
COL5A2P05997 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
COL5A2P05997 AC090877.2-201ENST00000558441 1738 ntBASIC31.38■■■□□ 2.61
COL5A2P05997 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.37■■■□□ 2.61
COL5A2P05997 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
COL5A2P05997 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
COL5A2P05997 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
COL5A2P05997 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.36■■■□□ 2.61
COL5A2P05997 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.36■■■□□ 2.61
COL5A2P05997 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
COL5A2P05997 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.36■■■□□ 2.61
COL5A2P05997 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.36■■■□□ 2.61
COL5A2P05997 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.36■■■□□ 2.61
COL5A2P05997 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.35■■■□□ 2.61
COL5A2P05997 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
COL5A2P05997 AL136967.2-201ENST00000623968 743 ntBASIC31.35■■■□□ 2.61
COL5A2P05997 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC31.35■■■□□ 2.61
COL5A2P05997 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.35■■■□□ 2.61
COL5A2P05997 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms