Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 PVT1_1.1-201ENST00000615125 194 ntBASIC21.13■□□□□ 0.97
RAF1P04049 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.13■□□□□ 0.97
RAF1P04049 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RAF1P04049 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RAF1P04049 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAF1P04049 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAF1P04049 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.12■□□□□ 0.97
RAF1P04049 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.12■□□□□ 0.97
RAF1P04049 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAF1P04049 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RAF1P04049 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.12■□□□□ 0.97
RAF1P04049 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RAF1P04049 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RAF1P04049 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.11■□□□□ 0.97
RAF1P04049 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAF1P04049 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAF1P04049 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAF1P04049 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RAF1P04049 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RAF1P04049 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.1■□□□□ 0.97
RAF1P04049 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAF1P04049 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAF1P04049 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.1■□□□□ 0.97
RAF1P04049 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.1■□□□□ 0.97
RAF1P04049 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.1■□□□□ 0.97
RAF1P04049 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAF1P04049 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAF1P04049 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAF1P04049 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAF1P04049 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAF1P04049 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RAF1P04049 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.09■□□□□ 0.97
RAF1P04049 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.09■□□□□ 0.97
RAF1P04049 AL031848.2-201ENST00000607670 837 ntBASIC21.09■□□□□ 0.97
RAF1P04049 AC012676.1-201ENST00000574705 1949 ntBASIC21.09■□□□□ 0.97
RAF1P04049 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAF1P04049 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAF1P04049 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAF1P04049 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAF1P04049 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
RAF1P04049 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAF1P04049 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.08■□□□□ 0.97
RAF1P04049 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RAF1P04049 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAF1P04049 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAF1P04049 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RAF1P04049 AC138932.3-201ENST00000567634 1902 ntBASIC21.08■□□□□ 0.96
RAF1P04049 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAF1P04049 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAF1P04049 AL139125.2-201ENST00000623134 1869 ntBASIC21.07■□□□□ 0.96
RAF1P04049 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAF1P04049 LINC00543-201ENST00000567234 1845 ntBASIC21.07■□□□□ 0.96
RAF1P04049 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.07■□□□□ 0.96
RAF1P04049 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAF1P04049 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAF1P04049 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAF1P04049 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.07■□□□□ 0.96
RAF1P04049 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAF1P04049 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAF1P04049 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAF1P04049 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAF1P04049 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAF1P04049 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
RAF1P04049 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.06■□□□□ 0.96
RAF1P04049 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAF1P04049 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.06■□□□□ 0.96
RAF1P04049 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.06■□□□□ 0.96
RAF1P04049 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.06■□□□□ 0.96
RAF1P04049 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAF1P04049 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAF1P04049 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RAF1P04049 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RAF1P04049 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAF1P04049 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.05■□□□□ 0.96
RAF1P04049 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAF1P04049 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.05■□□□□ 0.96
RAF1P04049 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.05■□□□□ 0.96
RAF1P04049 AL356441.2-201ENST00000443009 864 ntBASIC21.05■□□□□ 0.96
RAF1P04049 AC103724.3-201ENST00000564481 992 ntBASIC21.05■□□□□ 0.96
RAF1P04049 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAF1P04049 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.05■□□□□ 0.96
RAF1P04049 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAF1P04049 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAF1P04049 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAF1P04049 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAF1P04049 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAF1P04049 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAF1P04049 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAF1P04049 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.04■□□□□ 0.96
RAF1P04049 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RAF1P04049 AC096887.2-201ENST00000623443 1957 ntBASIC21.04■□□□□ 0.96
RAF1P04049 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.04■□□□□ 0.96
RAF1P04049 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAF1P04049 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.04■□□□□ 0.96
RAF1P04049 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAF1P04049 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.03■□□□□ 0.96
RAF1P04049 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAF1P04049 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.03■□□□□ 0.96
RAF1P04049 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAF1P04049 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms