Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV3P03979 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV3P03979 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRGV3P03979 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRGV3P03979 SLC6A10P-202ENST00000431994 2058 ntBASIC18.4■□□□□ 0.54
TRGV3P03979 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV3P03979 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV3P03979 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV3P03979 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.4■□□□□ 0.54
TRGV3P03979 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.4■□□□□ 0.54
TRGV3P03979 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.4■□□□□ 0.54
TRGV3P03979 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.4■□□□□ 0.54
TRGV3P03979 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRGV3P03979 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRGV3P03979 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRGV3P03979 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRGV3P03979 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV3P03979 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV3P03979 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.39■□□□□ 0.53
TRGV3P03979 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV3P03979 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.39■□□□□ 0.53
TRGV3P03979 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV3P03979 PVT1_1.1-201ENST00000615125 194 ntBASIC18.39■□□□□ 0.53
TRGV3P03979 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRGV3P03979 KRT8P33-201ENST00000508125 1423 ntBASIC18.39■□□□□ 0.53
TRGV3P03979 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRGV3P03979 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.39■□□□□ 0.53
TRGV3P03979 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV3P03979 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV3P03979 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV3P03979 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.38■□□□□ 0.53
TRGV3P03979 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.38■□□□□ 0.53
TRGV3P03979 AC022616.5-201ENST00000518796 181 ntBASIC18.38■□□□□ 0.53
TRGV3P03979 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV3P03979 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRGV3P03979 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRGV3P03979 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV3P03979 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV3P03979 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV3P03979 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV3P03979 YBX1P4-201ENST00000392794 808 ntBASIC18.37■□□□□ 0.53
TRGV3P03979 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRGV3P03979 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV3P03979 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TRGV3P03979 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV3P03979 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV3P03979 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV3P03979 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRGV3P03979 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
TRGV3P03979 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV3P03979 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRGV3P03979 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV3P03979 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV3P03979 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.36■□□□□ 0.53
TRGV3P03979 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRGV3P03979 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.36■□□□□ 0.53
TRGV3P03979 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV3P03979 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.36■□□□□ 0.53
TRGV3P03979 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV3P03979 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV3P03979 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.35■□□□□ 0.53
TRGV3P03979 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV3P03979 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV3P03979 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.35■□□□□ 0.53
TRGV3P03979 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.35■□□□□ 0.53
TRGV3P03979 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV3P03979 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV3P03979 AC022211.4-201ENST00000625094 2161 ntBASIC18.35■□□□□ 0.53
TRGV3P03979 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV3P03979 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV3P03979 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV3P03979 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRGV3P03979 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.35■□□□□ 0.53
TRGV3P03979 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV3P03979 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV3P03979 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV3P03979 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV3P03979 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRGV3P03979 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRGV3P03979 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV3P03979 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRGV3P03979 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.33■□□□□ 0.52
TRGV3P03979 MIR4508-201ENST00000584178 70 ntBASIC18.33■□□□□ 0.52
TRGV3P03979 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV3P03979 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRGV3P03979 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRGV3P03979 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV3P03979 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRGV3P03979 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV3P03979 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV3P03979 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRGV3P03979 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV3P03979 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV3P03979 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV3P03979 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV3P03979 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV3P03979 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV3P03979 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV3P03979 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRGV3P03979 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms