Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
CSPG5O95196 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CSPG5O95196 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CSPG5O95196 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
CSPG5O95196 AC011551.1-201ENST00000614101 683 ntBASIC25.24■■□□□ 1.63
CSPG5O95196 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.24■■□□□ 1.63
CSPG5O95196 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
CSPG5O95196 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CSPG5O95196 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
CSPG5O95196 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.23■■□□□ 1.63
CSPG5O95196 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CSPG5O95196 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CSPG5O95196 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.22■■□□□ 1.63
CSPG5O95196 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
CSPG5O95196 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.22■■□□□ 1.63
CSPG5O95196 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.22■■□□□ 1.63
CSPG5O95196 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.22■■□□□ 1.63
CSPG5O95196 AC092666.2-201ENST00000613287 246 ntBASIC25.22■■□□□ 1.63
CSPG5O95196 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CSPG5O95196 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CSPG5O95196 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.21■■□□□ 1.63
CSPG5O95196 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CSPG5O95196 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CSPG5O95196 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CSPG5O95196 AF131216.4-201ENST00000638924 1588 ntBASIC25.2■■□□□ 1.62
CSPG5O95196 AC142381.2-201ENST00000566120 298 ntBASIC25.2■■□□□ 1.62
CSPG5O95196 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
CSPG5O95196 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CSPG5O95196 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CSPG5O95196 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CSPG5O95196 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSPG5O95196 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CSPG5O95196 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CSPG5O95196 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.18■■□□□ 1.62
CSPG5O95196 RARRES2P6-201ENST00000567333 442 ntBASIC25.18■■□□□ 1.62
CSPG5O95196 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.18■■□□□ 1.62
CSPG5O95196 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.18■■□□□ 1.62
CSPG5O95196 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSPG5O95196 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CSPG5O95196 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSPG5O95196 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSPG5O95196 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.17■■□□□ 1.62
CSPG5O95196 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.17■■□□□ 1.62
CSPG5O95196 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.17■■□□□ 1.62
CSPG5O95196 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.17■■□□□ 1.62
CSPG5O95196 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.62
CSPG5O95196 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.16■■□□□ 1.62
CSPG5O95196 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CSPG5O95196 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.16■■□□□ 1.62
CSPG5O95196 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CSPG5O95196 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.16■■□□□ 1.62
CSPG5O95196 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CSPG5O95196 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CSPG5O95196 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CSPG5O95196 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.15■■□□□ 1.62
CSPG5O95196 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CSPG5O95196 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CSPG5O95196 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CSPG5O95196 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CSPG5O95196 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.15■■□□□ 1.62
CSPG5O95196 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CSPG5O95196 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CSPG5O95196 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CSPG5O95196 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CSPG5O95196 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CSPG5O95196 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.14■■□□□ 1.62
CSPG5O95196 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.14■■□□□ 1.62
CSPG5O95196 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CSPG5O95196 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CSPG5O95196 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.14■■□□□ 1.61
CSPG5O95196 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.14■■□□□ 1.61
CSPG5O95196 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CSPG5O95196 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CSPG5O95196 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CSPG5O95196 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CSPG5O95196 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CSPG5O95196 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CSPG5O95196 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CSPG5O95196 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CSPG5O95196 UNC93B3-201ENST00000308076 687 ntBASIC25.12■■□□□ 1.61
CSPG5O95196 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.12■■□□□ 1.61
CSPG5O95196 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CSPG5O95196 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.12■■□□□ 1.61
CSPG5O95196 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CSPG5O95196 AC106739.1-201ENST00000617035 715 ntBASIC25.12■■□□□ 1.61
CSPG5O95196 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.12■■□□□ 1.61
CSPG5O95196 AC142086.6-201ENST00000621154 1765 ntBASIC25.12■■□□□ 1.61
CSPG5O95196 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.11■■□□□ 1.61
CSPG5O95196 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.11■■□□□ 1.61
CSPG5O95196 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CSPG5O95196 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.11■■□□□ 1.61
CSPG5O95196 FOXO3B-201ENST00000395675 1928 ntBASIC25.11■■□□□ 1.61
CSPG5O95196 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
CSPG5O95196 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CSPG5O95196 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CSPG5O95196 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.1■■□□□ 1.61
CSPG5O95196 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.1■■□□□ 1.61
CSPG5O95196 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.1■■□□□ 1.61
CSPG5O95196 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.1■■□□□ 1.61
CSPG5O95196 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms