Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TSPAN3O60637 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
TSPAN3O60637 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.26■■□□□ 1.47
TSPAN3O60637 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TSPAN3O60637 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TSPAN3O60637 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TSPAN3O60637 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.25■■□□□ 1.47
TSPAN3O60637 KRT125P-201ENST00000546827 989 ntBASIC24.25■■□□□ 1.47
TSPAN3O60637 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TSPAN3O60637 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.25■■□□□ 1.47
TSPAN3O60637 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.24■■□□□ 1.47
TSPAN3O60637 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TSPAN3O60637 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.23■■□□□ 1.47
TSPAN3O60637 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.23■■□□□ 1.47
TSPAN3O60637 MIR4787-201ENST00000607364 84 ntBASIC24.23■■□□□ 1.47
TSPAN3O60637 AC011551.1-201ENST00000614101 683 ntBASIC24.23■■□□□ 1.47
TSPAN3O60637 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TSPAN3O60637 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
TSPAN3O60637 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TSPAN3O60637 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TSPAN3O60637 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.22■■□□□ 1.47
TSPAN3O60637 AC137630.3-201ENST00000607245 391 ntBASIC24.22■■□□□ 1.47
TSPAN3O60637 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.22■■□□□ 1.47
TSPAN3O60637 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TSPAN3O60637 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TSPAN3O60637 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TSPAN3O60637 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.21■■□□□ 1.47
TSPAN3O60637 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.21■■□□□ 1.47
TSPAN3O60637 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TSPAN3O60637 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.21■■□□□ 1.47
TSPAN3O60637 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.21■■□□□ 1.47
TSPAN3O60637 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.21■■□□□ 1.47
TSPAN3O60637 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
TSPAN3O60637 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TSPAN3O60637 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.46
TSPAN3O60637 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.2■■□□□ 1.46
TSPAN3O60637 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
TSPAN3O60637 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TSPAN3O60637 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.19■■□□□ 1.46
TSPAN3O60637 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
TSPAN3O60637 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
TSPAN3O60637 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TSPAN3O60637 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TSPAN3O60637 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.18■■□□□ 1.46
TSPAN3O60637 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.18■■□□□ 1.46
TSPAN3O60637 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
TSPAN3O60637 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
TSPAN3O60637 AC090877.2-201ENST00000558441 1738 ntBASIC24.18■■□□□ 1.46
TSPAN3O60637 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TSPAN3O60637 SLC6A10P-202ENST00000431994 2058 ntBASIC24.17■■□□□ 1.46
TSPAN3O60637 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
TSPAN3O60637 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.17■■□□□ 1.46
TSPAN3O60637 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TSPAN3O60637 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.17■■□□□ 1.46
TSPAN3O60637 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.17■■□□□ 1.46
TSPAN3O60637 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TSPAN3O60637 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TSPAN3O60637 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.17■■□□□ 1.46
TSPAN3O60637 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TSPAN3O60637 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.16■■□□□ 1.46
TSPAN3O60637 AC021242.3-201ENST00000607598 1377 ntBASIC24.16■■□□□ 1.46
TSPAN3O60637 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TSPAN3O60637 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.15■■□□□ 1.46
TSPAN3O60637 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.15■■□□□ 1.46
TSPAN3O60637 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TSPAN3O60637 TSPY9P-201ENST00000440215 945 ntBASIC24.15■■□□□ 1.46
TSPAN3O60637 TSPY11P-201ENST00000442607 1045 ntBASIC24.15■■□□□ 1.46
TSPAN3O60637 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TSPAN3O60637 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.14■■□□□ 1.46
TSPAN3O60637 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TSPAN3O60637 AL356441.2-201ENST00000443009 864 ntBASIC24.14■■□□□ 1.45
TSPAN3O60637 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.14■■□□□ 1.45
TSPAN3O60637 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TSPAN3O60637 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TSPAN3O60637 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TSPAN3O60637 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.13■■□□□ 1.45
TSPAN3O60637 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.13■■□□□ 1.45
TSPAN3O60637 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TSPAN3O60637 UNC93B8-201ENST00000511903 705 ntBASIC24.13■■□□□ 1.45
TSPAN3O60637 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.13■■□□□ 1.45
TSPAN3O60637 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
TSPAN3O60637 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
TSPAN3O60637 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TSPAN3O60637 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSPAN3O60637 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.12■■□□□ 1.45
TSPAN3O60637 AC131212.1-201ENST00000613771 668 ntBASIC24.12■■□□□ 1.45
TSPAN3O60637 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSPAN3O60637 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSPAN3O60637 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.11■■□□□ 1.45
TSPAN3O60637 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.11■■□□□ 1.45
TSPAN3O60637 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
TSPAN3O60637 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.11■■□□□ 1.45
TSPAN3O60637 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TSPAN3O60637 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
TSPAN3O60637 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.11■■□□□ 1.45
TSPAN3O60637 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.11■■□□□ 1.45
TSPAN3O60637 AF131216.4-201ENST00000638924 1588 ntBASIC24.11■■□□□ 1.45
TSPAN3O60637 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TSPAN3O60637 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TSPAN3O60637 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms