Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGA12O60330 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PCDHGA12O60330 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PCDHGA12O60330 AL136116.3-201ENST00000402907 1138 ntBASIC23.29■■□□□ 1.32
PCDHGA12O60330 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHGA12O60330 MIR6724-1-201ENST00000616420 92 ntBASIC23.29■■□□□ 1.32
PCDHGA12O60330 MIR6724-2-201ENST00000616483 92 ntBASIC23.29■■□□□ 1.32
PCDHGA12O60330 MIR6724-4-201ENST00000617390 92 ntBASIC23.29■■□□□ 1.32
PCDHGA12O60330 MIR6724-3-201ENST00000622482 92 ntBASIC23.29■■□□□ 1.32
PCDHGA12O60330 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGA12O60330 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHGA12O60330 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA12O60330 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA12O60330 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
PCDHGA12O60330 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA12O60330 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHGA12O60330 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA12O60330 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PCDHGA12O60330 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PCDHGA12O60330 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA12O60330 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA12O60330 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHGA12O60330 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDHGA12O60330 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDHGA12O60330 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
PCDHGA12O60330 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA12O60330 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA12O60330 MTDHP2-201ENST00000601468 714 ntBASIC23.26■■□□□ 1.31
PCDHGA12O60330 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA12O60330 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHGA12O60330 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDHGA12O60330 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA12O60330 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA12O60330 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA12O60330 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHGA12O60330 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA12O60330 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA12O60330 AL356740.2-201ENST00000601559 647 ntBASIC23.25■■□□□ 1.31
PCDHGA12O60330 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHGA12O60330 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PCDHGA12O60330 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
PCDHGA12O60330 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA12O60330 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGA12O60330 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGA12O60330 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHGA12O60330 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHGA12O60330 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHGA12O60330 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA12O60330 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGA12O60330 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PCDHGA12O60330 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA12O60330 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PCDHGA12O60330 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGA12O60330 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHGA12O60330 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PCDHGA12O60330 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA12O60330 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA12O60330 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA12O60330 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDHGA12O60330 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PCDHGA12O60330 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHGA12O60330 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PCDHGA12O60330 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA12O60330 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA12O60330 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGA12O60330 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA12O60330 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGA12O60330 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA12O60330 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA12O60330 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA12O60330 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHGA12O60330 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA12O60330 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA12O60330 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA12O60330 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA12O60330 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA12O60330 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA12O60330 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA12O60330 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.2■■□□□ 1.3
PCDHGA12O60330 AC110285.6-201ENST00000617652 491 ntBASIC23.2■■□□□ 1.3
PCDHGA12O60330 AP004609.3-201ENST00000610705 1884 ntBASIC23.19■■□□□ 1.3
PCDHGA12O60330 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGA12O60330 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHGA12O60330 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA12O60330 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
PCDHGA12O60330 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGA12O60330 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGA12O60330 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHGA12O60330 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA12O60330 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA12O60330 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA12O60330 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA12O60330 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PCDHGA12O60330 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA12O60330 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHGA12O60330 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA12O60330 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA12O60330 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGA12O60330 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHGA12O60330 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms