Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 MIR6089-201ENST00000616698 64 ntBASIC21.66■■□□□ 1.06
TNFRSF11BO00300 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF11BO00300 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TNFRSF11BO00300 DUSP8P5-201ENST00000422884 1815 ntBASIC21.65■■□□□ 1.06
TNFRSF11BO00300 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.65■■□□□ 1.06
TNFRSF11BO00300 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF11BO00300 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF11BO00300 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TNFRSF11BO00300 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.65■■□□□ 1.06
TNFRSF11BO00300 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.65■■□□□ 1.06
TNFRSF11BO00300 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
TNFRSF11BO00300 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.64■■□□□ 1.06
TNFRSF11BO00300 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
TNFRSF11BO00300 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNFRSF11BO00300 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFRSF11BO00300 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF11BO00300 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TNFRSF11BO00300 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF11BO00300 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF11BO00300 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF11BO00300 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF11BO00300 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF11BO00300 ABCB10P4-201ENST00000566803 2184 ntBASIC21.63■■□□□ 1.05
TNFRSF11BO00300 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TNFRSF11BO00300 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TNFRSF11BO00300 AC025884.2-201ENST00000553429 711 ntBASIC21.62■■□□□ 1.05
TNFRSF11BO00300 MIR3960-201ENST00000583311 91 ntBASIC21.62■■□□□ 1.05
TNFRSF11BO00300 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TNFRSF11BO00300 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF11BO00300 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF11BO00300 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF11BO00300 AL157400.5-201ENST00000507624 621 ntBASIC21.61■■□□□ 1.05
TNFRSF11BO00300 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF11BO00300 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.61■■□□□ 1.05
TNFRSF11BO00300 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF11BO00300 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF11BO00300 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TNFRSF11BO00300 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFRSF11BO00300 MIR3648-2-201ENST00000581792 180 ntBASIC21.59■■□□□ 1.05
TNFRSF11BO00300 MIR3648-1-201ENST00000615959 180 ntBASIC21.59■■□□□ 1.05
TNFRSF11BO00300 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFRSF11BO00300 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TNFRSF11BO00300 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFRSF11BO00300 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFRSF11BO00300 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFRSF11BO00300 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TNFRSF11BO00300 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.58■■□□□ 1.05
TNFRSF11BO00300 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.58■■□□□ 1.05
TNFRSF11BO00300 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.58■■□□□ 1.05
TNFRSF11BO00300 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TNFRSF11BO00300 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TNFRSF11BO00300 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF11BO00300 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TNFRSF11BO00300 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF11BO00300 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.57■■□□□ 1.04
TNFRSF11BO00300 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.57■■□□□ 1.04
TNFRSF11BO00300 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TNFRSF11BO00300 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TNFRSF11BO00300 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TNFRSF11BO00300 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNFRSF11BO00300 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF11BO00300 HLA-L-211ENST00000482052 1765 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms