Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC13.24□□□□□ -0.29
CHKB-CPT1BH3BT56 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHKB-CPT1BH3BT56 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CHKB-CPT1BH3BT56 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHKB-CPT1BH3BT56 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHKB-CPT1BH3BT56 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CHKB-CPT1BH3BT56 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CHKB-CPT1BH3BT56 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 C9orf163-202ENST00000624034 2573 ntBASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHKB-CPT1BH3BT56 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHKB-CPT1BH3BT56 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHKB-CPT1BH3BT56 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHKB-CPT1BH3BT56 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHKB-CPT1BH3BT56 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHKB-CPT1BH3BT56 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CHKB-CPT1BH3BT56 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CHKB-CPT1BH3BT56 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CHKB-CPT1BH3BT56 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CHKB-CPT1BH3BT56 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHKB-CPT1BH3BT56 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHKB-CPT1BH3BT56 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHKB-CPT1BH3BT56 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CHKB-CPT1BH3BT56 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHKB-CPT1BH3BT56 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
CHKB-CPT1BH3BT56 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHKB-CPT1BH3BT56 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHKB-CPT1BH3BT56 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHKB-CPT1BH3BT56 PKD1P1-201ENST00000458669 6805 ntBASIC13.2□□□□□ -0.3
CHKB-CPT1BH3BT56 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CHKB-CPT1BH3BT56 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC13.2□□□□□ -0.3
CHKB-CPT1BH3BT56 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHKB-CPT1BH3BT56 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC13.2□□□□□ -0.3
CHKB-CPT1BH3BT56 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHKB-CPT1BH3BT56 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC13.2□□□□□ -0.3
CHKB-CPT1BH3BT56 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 CASK-201ENST00000378154 2494 ntTSL 5 BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHKB-CPT1BH3BT56 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 PROC-203ENST00000409048 1586 ntTSL 5 BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CHKB-CPT1BH3BT56 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHKB-CPT1BH3BT56 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CHKB-CPT1BH3BT56 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHKB-CPT1BH3BT56 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHKB-CPT1BH3BT56 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHKB-CPT1BH3BT56 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHKB-CPT1BH3BT56 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CHKB-CPT1BH3BT56 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms