Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00473A8K010 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LINC00473A8K010 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00473A8K010 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00473A8K010 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00473A8K010 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00473A8K010 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC00473A8K010 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC00473A8K010 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00473A8K010 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00473A8K010 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00473A8K010 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00473A8K010 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00473A8K010 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC00473A8K010 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00473A8K010 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00473A8K010 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC00473A8K010 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LINC00473A8K010 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00473A8K010 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.09■□□□□ 0.65
LINC00473A8K010 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LINC00473A8K010 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00473A8K010 FOXO3B-201ENST00000395675 1928 ntBASIC19.09■□□□□ 0.65
LINC00473A8K010 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00473A8K010 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.09■□□□□ 0.65
LINC00473A8K010 AC004812.2-201ENST00000611079 2094 ntBASIC19.09■□□□□ 0.65
LINC00473A8K010 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC00473A8K010 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LINC00473A8K010 AC009831.1-201ENST00000580420 1582 ntBASIC19.08■□□□□ 0.65
LINC00473A8K010 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00473A8K010 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00473A8K010 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.08■□□□□ 0.64
LINC00473A8K010 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00473A8K010 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00473A8K010 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
LINC00473A8K010 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC00473A8K010 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.07■□□□□ 0.64
LINC00473A8K010 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC00473A8K010 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00473A8K010 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00473A8K010 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LINC00473A8K010 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00473A8K010 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00473A8K010 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00473A8K010 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.07■□□□□ 0.64
LINC00473A8K010 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.07■□□□□ 0.64
LINC00473A8K010 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00473A8K010 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00473A8K010 KRT18P10-201ENST00000388836 1287 ntBASIC19.06■□□□□ 0.64
LINC00473A8K010 AC133552.2-201ENST00000619106 1032 ntBASIC19.06■□□□□ 0.64
LINC00473A8K010 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00473A8K010 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.06■□□□□ 0.64
LINC00473A8K010 HLA-L-211ENST00000482052 1765 ntBASIC19.06■□□□□ 0.64
LINC00473A8K010 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00473A8K010 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00473A8K010 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00473A8K010 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.05■□□□□ 0.64
LINC00473A8K010 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00473A8K010 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00473A8K010 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00473A8K010 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00473A8K010 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LINC00473A8K010 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINC00473A8K010 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00473A8K010 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00473A8K010 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00473A8K010 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC00473A8K010 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC00473A8K010 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LINC00473A8K010 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LINC00473A8K010 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINC00473A8K010 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.04■□□□□ 0.64
LINC00473A8K010 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.03■□□□□ 0.64
LINC00473A8K010 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00473A8K010 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00473A8K010 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00473A8K010 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00473A8K010 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.03■□□□□ 0.64
LINC00473A8K010 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00473A8K010 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00473A8K010 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00473A8K010 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LINC00473A8K010 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00473A8K010 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00473A8K010 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00473A8K010 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LINC00473A8K010 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.02■□□□□ 0.64
LINC00473A8K010 RNF126P1-201ENST00000567452 1320 ntBASIC19.02■□□□□ 0.64
LINC00473A8K010 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LINC00473A8K010 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00473A8K010 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00473A8K010 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00473A8K010 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00473A8K010 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.02■□□□□ 0.64
LINC00473A8K010 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LINC00473A8K010 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LINC00473A8K010 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LINC00473A8K010 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.02■□□□□ 0.63
LINC00473A8K010 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
LINC00473A8K010 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms