Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.93■■□□□ 1.42
TCRBV7S3A2A0A539 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.93■■□□□ 1.42
TCRBV7S3A2A0A539 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
TCRBV7S3A2A0A539 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV7S3A2A0A539 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.93■■□□□ 1.42
TCRBV7S3A2A0A539 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV7S3A2A0A539 AC009831.1-201ENST00000580420 1582 ntBASIC23.92■■□□□ 1.42
TCRBV7S3A2A0A539 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV7S3A2A0A539 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV7S3A2A0A539 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV7S3A2A0A539 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV7S3A2A0A539 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV7S3A2A0A539 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.91■■□□□ 1.42
TCRBV7S3A2A0A539 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.91■■□□□ 1.42
TCRBV7S3A2A0A539 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV7S3A2A0A539 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
TCRBV7S3A2A0A539 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV7S3A2A0A539 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV7S3A2A0A539 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TCRBV7S3A2A0A539 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV7S3A2A0A539 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.9■■□□□ 1.42
TCRBV7S3A2A0A539 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV7S3A2A0A539 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV7S3A2A0A539 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV7S3A2A0A539 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
TCRBV7S3A2A0A539 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TCRBV7S3A2A0A539 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TCRBV7S3A2A0A539 AC141586.4-201ENST00000624558 1573 ntBASIC23.89■■□□□ 1.41
TCRBV7S3A2A0A539 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TCRBV7S3A2A0A539 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.89■■□□□ 1.41
TCRBV7S3A2A0A539 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.89■■□□□ 1.41
TCRBV7S3A2A0A539 FOXO3B-201ENST00000395675 1928 ntBASIC23.88■■□□□ 1.41
TCRBV7S3A2A0A539 HLA-L-211ENST00000482052 1765 ntBASIC23.88■■□□□ 1.41
TCRBV7S3A2A0A539 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TCRBV7S3A2A0A539 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TCRBV7S3A2A0A539 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV7S3A2A0A539 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV7S3A2A0A539 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV7S3A2A0A539 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.88■■□□□ 1.41
TCRBV7S3A2A0A539 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV7S3A2A0A539 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.86■■□□□ 1.41
TCRBV7S3A2A0A539 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
TCRBV7S3A2A0A539 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.86■■□□□ 1.41
TCRBV7S3A2A0A539 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV7S3A2A0A539 AC133552.2-201ENST00000619106 1032 ntBASIC23.86■■□□□ 1.41
TCRBV7S3A2A0A539 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TCRBV7S3A2A0A539 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV7S3A2A0A539 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV7S3A2A0A539 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV7S3A2A0A539 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TCRBV7S3A2A0A539 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.85■■□□□ 1.41
TCRBV7S3A2A0A539 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV7S3A2A0A539 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV7S3A2A0A539 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV7S3A2A0A539 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.85■■□□□ 1.41
TCRBV7S3A2A0A539 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TCRBV7S3A2A0A539 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV7S3A2A0A539 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV7S3A2A0A539 ABCB10P4-201ENST00000566803 2184 ntBASIC23.84■■□□□ 1.41
TCRBV7S3A2A0A539 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV7S3A2A0A539 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV7S3A2A0A539 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.84■■□□□ 1.41
TCRBV7S3A2A0A539 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TCRBV7S3A2A0A539 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TCRBV7S3A2A0A539 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TCRBV7S3A2A0A539 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.83■■□□□ 1.41
TCRBV7S3A2A0A539 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TCRBV7S3A2A0A539 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TCRBV7S3A2A0A539 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
TCRBV7S3A2A0A539 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV7S3A2A0A539 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TCRBV7S3A2A0A539 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV7S3A2A0A539 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV7S3A2A0A539 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.81■■□□□ 1.4
TCRBV7S3A2A0A539 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.81■■□□□ 1.4
TCRBV7S3A2A0A539 RNF126P1-201ENST00000567452 1320 ntBASIC23.81■■□□□ 1.4
TCRBV7S3A2A0A539 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV7S3A2A0A539 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV7S3A2A0A539 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms