Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC090877.2-201ENST00000558441 1738 ntBASIC21.43■■□□□ 1.02
TRAV17A0A0B4J275 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV17A0A0B4J275 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.43■■□□□ 1.02
TRAV17A0A0B4J275 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV17A0A0B4J275 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV17A0A0B4J275 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV17A0A0B4J275 AC097639.1-201ENST00000565519 1891 ntBASIC21.43■■□□□ 1.02
TRAV17A0A0B4J275 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.43■■□□□ 1.02
TRAV17A0A0B4J275 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.42■■□□□ 1.02
TRAV17A0A0B4J275 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV17A0A0B4J275 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.42■■□□□ 1.02
TRAV17A0A0B4J275 AL139246.5-201ENST00000606645 996 ntBASIC21.42■■□□□ 1.02
TRAV17A0A0B4J275 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV17A0A0B4J275 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV17A0A0B4J275 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV17A0A0B4J275 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV17A0A0B4J275 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.41■■□□□ 1.02
TRAV17A0A0B4J275 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.41■■□□□ 1.02
TRAV17A0A0B4J275 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.41■■□□□ 1.02
TRAV17A0A0B4J275 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.41■■□□□ 1.02
TRAV17A0A0B4J275 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRAV17A0A0B4J275 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV17A0A0B4J275 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.4■■□□□ 1.02
TRAV17A0A0B4J275 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAV17A0A0B4J275 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAV17A0A0B4J275 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV17A0A0B4J275 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TRAV17A0A0B4J275 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TRAV17A0A0B4J275 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV17A0A0B4J275 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.4■■□□□ 1.02
TRAV17A0A0B4J275 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
TRAV17A0A0B4J275 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV17A0A0B4J275 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.39■■□□□ 1.01
TRAV17A0A0B4J275 MIR638-201ENST00000385237 100 ntBASIC21.39■■□□□ 1.01
TRAV17A0A0B4J275 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV17A0A0B4J275 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV17A0A0B4J275 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.39■■□□□ 1.01
TRAV17A0A0B4J275 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.39■■□□□ 1.01
TRAV17A0A0B4J275 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV17A0A0B4J275 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TRAV17A0A0B4J275 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV17A0A0B4J275 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV17A0A0B4J275 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV17A0A0B4J275 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV17A0A0B4J275 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.38■■□□□ 1.01
TRAV17A0A0B4J275 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV17A0A0B4J275 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRAV17A0A0B4J275 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.38■■□□□ 1.01
TRAV17A0A0B4J275 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV17A0A0B4J275 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV17A0A0B4J275 AC096887.2-201ENST00000623443 1957 ntBASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.37■■□□□ 1.01
TRAV17A0A0B4J275 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV17A0A0B4J275 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV17A0A0B4J275 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRAV17A0A0B4J275 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV17A0A0B4J275 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.36■■□□□ 1.01
TRAV17A0A0B4J275 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV17A0A0B4J275 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.36■■□□□ 1.01
TRAV17A0A0B4J275 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV17A0A0B4J275 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
TRAV17A0A0B4J275 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRAV17A0A0B4J275 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV17A0A0B4J275 ERN1-208ENST00000606895 2068 ntBASIC21.35■■□□□ 1.01
TRAV17A0A0B4J275 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAV17A0A0B4J275 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.35■■□□□ 1.01
TRAV17A0A0B4J275 MIR6722-201ENST00000617286 78 ntBASIC21.35■■□□□ 1.01
TRAV17A0A0B4J275 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV17A0A0B4J275 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.34■■□□□ 1.01
TRAV17A0A0B4J275 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV17A0A0B4J275 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
TRAV17A0A0B4J275 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.34■■□□□ 1.01
TRAV17A0A0B4J275 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.34■■□□□ 1.01
TRAV17A0A0B4J275 SNX5-217ENST00000606557 1087 ntBASIC21.34■■□□□ 1.01
TRAV17A0A0B4J275 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.34■■□□□ 1.01
TRAV17A0A0B4J275 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.34■■□□□ 1.01
TRAV17A0A0B4J275 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV17A0A0B4J275 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV17A0A0B4J275 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV17A0A0B4J275 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.33■■□□□ 1.01
TRAV17A0A0B4J275 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.33■■□□□ 1.01
TRAV17A0A0B4J275 AC010501.1-201ENST00000606270 1962 ntBASIC21.33■■□□□ 1.01
TRAV17A0A0B4J275 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV17A0A0B4J275 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.33■■□□□ 1.01
TRAV17A0A0B4J275 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
TRAV17A0A0B4J275 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TRAV17A0A0B4J275 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.32■■□□□ 1
TRAV17A0A0B4J275 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV17A0A0B4J275 MIR4466-201ENST00000606121 54 ntBASIC21.32■■□□□ 1
TRAV17A0A0B4J275 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms