Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV38-1A0A0B4J264 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV38-1A0A0B4J264 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRAV38-1A0A0B4J264 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV38-1A0A0B4J264 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRAV38-1A0A0B4J264 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV38-1A0A0B4J264 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.74■□□□□ 0.75
TRAV38-1A0A0B4J264 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV38-1A0A0B4J264 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV38-1A0A0B4J264 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV38-1A0A0B4J264 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRAV38-1A0A0B4J264 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRAV38-1A0A0B4J264 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV38-1A0A0B4J264 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV38-1A0A0B4J264 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV38-1A0A0B4J264 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV38-1A0A0B4J264 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV38-1A0A0B4J264 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV38-1A0A0B4J264 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV38-1A0A0B4J264 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRAV38-1A0A0B4J264 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV38-1A0A0B4J264 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRAV38-1A0A0B4J264 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV38-1A0A0B4J264 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV38-1A0A0B4J264 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV38-1A0A0B4J264 SLC6A10P-202ENST00000431994 2058 ntBASIC19.71■□□□□ 0.75
TRAV38-1A0A0B4J264 AC103834.1-201ENST00000520383 144 ntBASIC19.71■□□□□ 0.75
TRAV38-1A0A0B4J264 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV38-1A0A0B4J264 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV38-1A0A0B4J264 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV38-1A0A0B4J264 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV38-1A0A0B4J264 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV38-1A0A0B4J264 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV38-1A0A0B4J264 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV38-1A0A0B4J264 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRAV38-1A0A0B4J264 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV38-1A0A0B4J264 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV38-1A0A0B4J264 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAV38-1A0A0B4J264 RARRES2P1-201ENST00000474487 481 ntBASIC19.69■□□□□ 0.74
TRAV38-1A0A0B4J264 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV38-1A0A0B4J264 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV38-1A0A0B4J264 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV38-1A0A0B4J264 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV38-1A0A0B4J264 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV38-1A0A0B4J264 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 AC011551.1-201ENST00000614101 683 ntBASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV38-1A0A0B4J264 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV38-1A0A0B4J264 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRAV38-1A0A0B4J264 KRT18P24-201ENST00000344739 1156 ntBASIC19.67■□□□□ 0.74
TRAV38-1A0A0B4J264 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV38-1A0A0B4J264 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRAV38-1A0A0B4J264 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV38-1A0A0B4J264 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV38-1A0A0B4J264 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 AC103724.3-201ENST00000564481 992 ntBASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 THA1P-201ENST00000590384 1145 ntBASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV38-1A0A0B4J264 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV38-1A0A0B4J264 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV38-1A0A0B4J264 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRAV38-1A0A0B4J264 AL031848.2-201ENST00000607670 837 ntBASIC19.65■□□□□ 0.74
TRAV38-1A0A0B4J264 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms