Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV9-2A0A087WT02 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV9-2A0A087WT02 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV9-2A0A087WT02 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV9-2A0A087WT02 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV9-2A0A087WT02 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV9-2A0A087WT02 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV9-2A0A087WT02 AC110285.7-201ENST00000624417 1536 ntBASIC17.3■□□□□ 0.36
TRAV9-2A0A087WT02 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV9-2A0A087WT02 AC010501.1-201ENST00000606270 1962 ntBASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-2A0A087WT02 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV9-2A0A087WT02 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV9-2A0A087WT02 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV9-2A0A087WT02 C1orf229-201ENST00000623686 2258 ntBASIC17.27■□□□□ 0.36
TRAV9-2A0A087WT02 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV9-2A0A087WT02 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV9-2A0A087WT02 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV9-2A0A087WT02 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV9-2A0A087WT02 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV9-2A0A087WT02 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV9-2A0A087WT02 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV9-2A0A087WT02 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRAV9-2A0A087WT02 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-2A0A087WT02 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-2A0A087WT02 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-2A0A087WT02 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAV9-2A0A087WT02 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV9-2A0A087WT02 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-2A0A087WT02 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-2A0A087WT02 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRAV9-2A0A087WT02 C9orf163-202ENST00000624034 2573 ntBASIC17.23■□□□□ 0.35
TRAV9-2A0A087WT02 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV9-2A0A087WT02 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 EP400NL-214ENST00000641289 2402 ntBASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV9-2A0A087WT02 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms