Protein–RNA interactions for Protein: A0A075B6N1

TRBV19, T-cell receptor beta variable 19 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19A0A075B6N1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV19A0A075B6N1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRBV19A0A075B6N1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV19A0A075B6N1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
TRBV19A0A075B6N1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV19A0A075B6N1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV19A0A075B6N1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV19A0A075B6N1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV19A0A075B6N1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV19A0A075B6N1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV19A0A075B6N1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV19A0A075B6N1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV19A0A075B6N1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV19A0A075B6N1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV19A0A075B6N1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV19A0A075B6N1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV19A0A075B6N1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.88■□□□□ 0.45
TRBV19A0A075B6N1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV19A0A075B6N1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV19A0A075B6N1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV19A0A075B6N1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRBV19A0A075B6N1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV19A0A075B6N1 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV19A0A075B6N1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV19A0A075B6N1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV19A0A075B6N1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRBV19A0A075B6N1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 AC092296.2-201ENST00000589470 999 ntBASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
TRBV19A0A075B6N1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV19A0A075B6N1 AC068473.5-201ENST00000616428 2072 ntBASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 DUSP8P5-201ENST00000422884 1815 ntBASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.84■□□□□ 0.45
TRBV19A0A075B6N1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV19A0A075B6N1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV19A0A075B6N1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TRBV19A0A075B6N1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV19A0A075B6N1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.83■□□□□ 0.45
TRBV19A0A075B6N1 ABCB10P4-201ENST00000566803 2184 ntBASIC17.83■□□□□ 0.45
TRBV19A0A075B6N1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.83■□□□□ 0.44
TRBV19A0A075B6N1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 HLA-L-211ENST00000482052 1765 ntBASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 RP9P-202ENST00000450133 1212 ntBASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 ECEL1P2-201ENST00000461596 1295 ntBASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRBV19A0A075B6N1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV19A0A075B6N1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.81■□□□□ 0.44
TRBV19A0A075B6N1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.81■□□□□ 0.44
TRBV19A0A075B6N1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV19A0A075B6N1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV19A0A075B6N1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV19A0A075B6N1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV19A0A075B6N1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRBV19A0A075B6N1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV19A0A075B6N1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRBV19A0A075B6N1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV19A0A075B6N1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV19A0A075B6N1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV19A0A075B6N1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms