Protein–RNA interactions for Protein: Q99271

NHA1, Na(+)/H(+) antiporter, yeastyeast

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHA1Q99271 MOT3YMR070W 1473 nt12.29□□□□□ -0.44
NHA1Q99271 TAT1YBR069C 1860 nt12.28□□□□□ -0.44
NHA1Q99271 RPP2AYOL039W 321 nt12.26□□□□□ -0.45
NHA1Q99271 YBR220CYBR220C 1683 nt12.26□□□□□ -0.45
NHA1Q99271 YDL221WYDL221W 552 nt12.24□□□□□ -0.45
NHA1Q99271 PTP1YDL230W 1008 nt12.23□□□□□ -0.45
NHA1Q99271 SUF2tP(AGG)C 72 nt12.21□□□□□ -0.45
NHA1Q99271 SUF10tP(AGG)N 72 nt12.21□□□□□ -0.45
NHA1Q99271 CAC2YML102W 1407 nt12.2□□□□□ -0.46
NHA1Q99271 CCT6YDR188W 1641 nt12.18□□□□□ -0.46
NHA1Q99271 SDH1YKL148C 1923 nt12.15□□□□□ -0.46
NHA1Q99271 PUS2YGL063W 1113 nt12.13□□□□□ -0.47
NHA1Q99271 SIS1YNL007C 1059 nt12.12□□□□□ -0.47
NHA1Q99271 tM(CAU)CtM(CAU)C 72 nt12.11□□□□□ -0.47
NHA1Q99271 IMT4tM(CAU)E 72 nt12.11□□□□□ -0.47
NHA1Q99271 IMT3tM(CAU)J3 72 nt12.11□□□□□ -0.47
NHA1Q99271 IMT1tM(CAU)O1 72 nt12.11□□□□□ -0.47
NHA1Q99271 IMT2tM(CAU)P 72 nt12.11□□□□□ -0.47
NHA1Q99271 YGR139WYGR139W 339 nt12.11□□□□□ -0.47
NHA1Q99271 WHI5YOR083W 888 nt12.1□□□□□ -0.47
NHA1Q99271 YLR281CYLR281C 468 nt12.09□□□□□ -0.47
NHA1Q99271 SCC4YER147C 1875 nt12.03□□□□□ -0.48
NHA1Q99271 IRC15YPL017C 1500 nt12.02□□□□□ -0.48
NHA1Q99271 YJL152WYJL152W 360 nt12.02□□□□□ -0.49
NHA1Q99271 YLR154C-GYLR154C-G 150 nt11.99□□□□□ -0.49
NHA1Q99271 GIS3YLR094C 1509 nt11.96□□□□□ -0.5
NHA1Q99271 ART5YGR068C 1761 nt11.95□□□□□ -0.5
NHA1Q99271 GFD2YCL036W 1701 nt11.94□□□□□ -0.5
NHA1Q99271 IMP2'YIL154C 1041 nt11.93□□□□□ -0.5
NHA1Q99271 SEC11YIR022W 504 nt11.92□□□□□ -0.5
NHA1Q99271 PET9YBL030C 957 nt11.89□□□□□ -0.51
NHA1Q99271 PCH2YBR186W 1695 nt11.88□□□□□ -0.51
NHA1Q99271 DSK2YMR276W 1122 nt11.87□□□□□ -0.51
NHA1Q99271 RTS2YOR077W 699 nt11.87□□□□□ -0.51
NHA1Q99271 GUT2YIL155C 1950 nt11.83□□□□□ -0.52
NHA1Q99271 FMP45YDL222C 930 nt11.82□□□□□ -0.52
NHA1Q99271 YCH1YGR203W 447 nt11.82□□□□□ -0.52
NHA1Q99271 FRE6YLL051C 2139 nt11.81□□□□□ -0.52
NHA1Q99271 IDH1YNL037C 1083 nt11.79□□□□□ -0.52
NHA1Q99271 YSC84YHR016C 1407 nt11.78□□□□□ -0.52
NHA1Q99271 TIR4YOR009W 1464 nt11.77□□□□□ -0.52
NHA1Q99271 CUE1YMR264W 612 nt11.77□□□□□ -0.53
NHA1Q99271 SSN3YPL042C 1668 nt11.72□□□□□ -0.53
NHA1Q99271 YMR057CYMR057C 372 nt11.7□□□□□ -0.54
NHA1Q99271 YCL048W-AYCL048W-A 240 nt11.7□□□□□ -0.54
NHA1Q99271 YHL050CYHL050C 2094 nt11.68□□□□□ -0.54
NHA1Q99271 YDR433WYDR433W 441 nt11.67□□□□□ -0.54
NHA1Q99271 YIL100WYIL100W 354 nt11.66□□□□□ -0.54
NHA1Q99271 YNL195CYNL195C 786 nt11.66□□□□□ -0.54
NHA1Q99271 MCH5YOR306C 1566 nt11.66□□□□□ -0.54
NHA1Q99271 RRT12YCR045C 1476 nt11.65□□□□□ -0.54
NHA1Q99271 YLR236CYLR236C 324 nt11.64□□□□□ -0.55
NHA1Q99271 GBP2YCL011C 1284 nt11.63□□□□□ -0.55
NHA1Q99271 YPR011CYPR011C 981 nt11.6□□□□□ -0.55
NHA1Q99271 PIB2YGL023C 1908 nt11.6□□□□□ -0.55
NHA1Q99271 RTF1YGL244W 1677 nt11.58□□□□□ -0.56
NHA1Q99271 NME1NME1 340 nt11.55□□□□□ -0.56
NHA1Q99271 BOP3YNL042W 1191 nt11.52□□□□□ -0.57
NHA1Q99271 LPX1YOR084W 1164 nt11.52□□□□□ -0.57
NHA1Q99271 TCD2YKL027W 1344 nt11.5□□□□□ -0.57
NHA1Q99271 YKR040CYKR040C 504 nt11.49□□□□□ -0.57
NHA1Q99271 ERV46YAL042W 1248 nt11.48□□□□□ -0.57
NHA1Q99271 MXR2YCL033C 507 nt11.4□□□□□ -0.58
NHA1Q99271 PTK1YKL198C 1989 nt11.37□□□□□ -0.59
NHA1Q99271 BOR1YNL275W 1731 nt11.36□□□□□ -0.59
NHA1Q99271 BSP1YPR171W 1731 nt11.35□□□□□ -0.59
NHA1Q99271 GID7YCL039W 2238 nt11.35□□□□□ -0.59
NHA1Q99271 YCL042WYCL042W 360 nt11.33□□□□□ -0.6
NHA1Q99271 NCP1YHR042W 2076 nt11.32□□□□□ -0.6
NHA1Q99271 YJL225CYJL225C 5277 nt11.32□□□□□ -0.6
NHA1Q99271 MRPL8YJL063C 717 nt11.32□□□□□ -0.6
NHA1Q99271 ADO1YJR105W 1023 nt11.32□□□□□ -0.6
NHA1Q99271 SPP1YPL138C 1062 nt11.3□□□□□ -0.6
NHA1Q99271 LCB1YMR296C 1677 nt11.21□□□□□ -0.61
NHA1Q99271 RDN37-1RDN37-1 5354 nt11.2□□□□□ -0.62
NHA1Q99271 RDN37-2RDN37-2 5354 nt11.2□□□□□ -0.62
NHA1Q99271 RRD1YIL153W 1182 nt11.2□□□□□ -0.62
NHA1Q99271 YFL054CYFL054C 1941 nt11.19□□□□□ -0.62
NHA1Q99271 YEL076C-AYEL076C-A 651 nt11.19□□□□□ -0.62
NHA1Q99271 YEL076CYEL076C 651 nt11.19□□□□□ -0.62
NHA1Q99271 YLR464WYLR464W 651 nt11.19□□□□□ -0.62
NHA1Q99271 FMP52YER004W 696 nt11.17□□□□□ -0.62
NHA1Q99271 ESBP6YNL125C 2022 nt11.17□□□□□ -0.62
NHA1Q99271 HUA1YGR268C 597 nt11.16□□□□□ -0.62
NHA1Q99271 DED1YOR204W 1815 nt11.14□□□□□ -0.63
NHA1Q99271 CWP1YKL096W 720 nt11.13□□□□□ -0.63
NHA1Q99271 NPP1YCR026C 2229 nt11.13□□□□□ -0.63
NHA1Q99271 YLR235CYLR235C 399 nt11.12□□□□□ -0.63
NHA1Q99271 FRD1YEL047C 1413 nt11.11□□□□□ -0.63
NHA1Q99271 PTH1YHR189W 573 nt11.11□□□□□ -0.63
NHA1Q99271 UBX6YJL048C 1191 nt11.11□□□□□ -0.63
NHA1Q99271 SIM1YIL123W 1431 nt11.1□□□□□ -0.63
NHA1Q99271 PCM1YEL058W 1674 nt11.1□□□□□ -0.63
NHA1Q99271 SPT8YLR055C 1809 nt11.09□□□□□ -0.63
NHA1Q99271 RTG1YOL067C 534 nt11.07□□□□□ -0.64
NHA1Q99271 YKL030WYKL030W 606 nt11.06□□□□□ -0.64
NHA1Q99271 SFP1YLR403W 2052 nt11.05□□□□□ -0.64
NHA1Q99271 SOR2YDL246C 1074 nt11.04□□□□□ -0.64
NHA1Q99271 SNF6YHL025W 999 nt11.04□□□□□ -0.64
NHA1Q99271 SOR1YJR159W 1074 nt11.04□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms