Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 PTP1YDL230W 1008 nt10.63□□□□□ -0.71
RFU1Q08003 YMR090WYMR090W 684 nt10.63□□□□□ -0.71
RFU1Q08003 EMI2YDR516C 1503 nt10.63□□□□□ -0.71
RFU1Q08003 TAT1YBR069C 1860 nt10.55□□□□□ -0.72
RFU1Q08003 YDL221WYDL221W 552 nt10.55□□□□□ -0.72
RFU1Q08003 CAC2YML102W 1407 nt10.55□□□□□ -0.72
RFU1Q08003 ART5YGR068C 1761 nt10.5□□□□□ -0.73
RFU1Q08003 YCH1YGR203W 447 nt10.49□□□□□ -0.73
RFU1Q08003 PET9YBL030C 957 nt10.49□□□□□ -0.73
RFU1Q08003 GFD2YCL036W 1701 nt10.48□□□□□ -0.73
RFU1Q08003 YLR154C-GYLR154C-G 150 nt10.48□□□□□ -0.73
RFU1Q08003 TIR4YOR009W 1464 nt10.46□□□□□ -0.74
RFU1Q08003 YJL152WYJL152W 360 nt10.43□□□□□ -0.74
RFU1Q08003 YBR220CYBR220C 1683 nt10.43□□□□□ -0.74
RFU1Q08003 SDH1YKL148C 1923 nt10.42□□□□□ -0.74
RFU1Q08003 IRC15YPL017C 1500 nt10.42□□□□□ -0.74
RFU1Q08003 YLR281CYLR281C 468 nt10.4□□□□□ -0.74
RFU1Q08003 WHI5YOR083W 888 nt10.4□□□□□ -0.74
RFU1Q08003 RTS2YOR077W 699 nt10.39□□□□□ -0.75
RFU1Q08003 UME6YDR207C 2511 nt10.36□□□□□ -0.75
RFU1Q08003 SCC4YER147C 1875 nt10.36□□□□□ -0.75
RFU1Q08003 GIS3YLR094C 1509 nt10.35□□□□□ -0.75
RFU1Q08003 YMR057CYMR057C 372 nt10.35□□□□□ -0.75
RFU1Q08003 CUE1YMR264W 612 nt10.31□□□□□ -0.76
RFU1Q08003 YCL048W-AYCL048W-A 240 nt10.3□□□□□ -0.76
RFU1Q08003 PUS2YGL063W 1113 nt10.28□□□□□ -0.76
RFU1Q08003 tM(CAU)CtM(CAU)C 72 nt10.24□□□□□ -0.77
RFU1Q08003 IMT4tM(CAU)E 72 nt10.24□□□□□ -0.77
RFU1Q08003 IMT3tM(CAU)J3 72 nt10.24□□□□□ -0.77
RFU1Q08003 IMT1tM(CAU)O1 72 nt10.24□□□□□ -0.77
RFU1Q08003 IMT2tM(CAU)P 72 nt10.24□□□□□ -0.77
RFU1Q08003 IMP2'YIL154C 1041 nt10.24□□□□□ -0.77
RFU1Q08003 IDH1YNL037C 1083 nt10.24□□□□□ -0.77
RFU1Q08003 YIL100WYIL100W 354 nt10.22□□□□□ -0.77
RFU1Q08003 YLR236CYLR236C 324 nt10.22□□□□□ -0.77
RFU1Q08003 DSK2YMR276W 1122 nt10.19□□□□□ -0.78
RFU1Q08003 SEC11YIR022W 504 nt10.15□□□□□ -0.78
RFU1Q08003 GBP2YCL011C 1284 nt10.15□□□□□ -0.78
RFU1Q08003 YNL195CYNL195C 786 nt10.14□□□□□ -0.79
RFU1Q08003 YSC84YHR016C 1407 nt10.1□□□□□ -0.79
RFU1Q08003 TCD2YKL027W 1344 nt10.07□□□□□ -0.8
RFU1Q08003 PCH2YBR186W 1695 nt10.05□□□□□ -0.8
RFU1Q08003 YDR433WYDR433W 441 nt10.04□□□□□ -0.8
RFU1Q08003 FMP45YDL222C 930 nt10.03□□□□□ -0.8
RFU1Q08003 YPR011CYPR011C 981 nt10.03□□□□□ -0.8
RFU1Q08003 RRT12YCR045C 1476 nt10.02□□□□□ -0.81
RFU1Q08003 RRD1YIL153W 1182 nt10.01□□□□□ -0.81
RFU1Q08003 YHL050CYHL050C 2094 nt10□□□□□ -0.81
RFU1Q08003 FMP52YER004W 696 nt9.97□□□□□ -0.81
RFU1Q08003 ERV46YAL042W 1248 nt9.97□□□□□ -0.81
RFU1Q08003 GUT2YIL155C 1950 nt9.97□□□□□ -0.81
RFU1Q08003 LPX1YOR084W 1164 nt9.95□□□□□ -0.82
RFU1Q08003 MXR2YCL033C 507 nt9.93□□□□□ -0.82
RFU1Q08003 DED1YOR204W 1815 nt9.93□□□□□ -0.82
RFU1Q08003 YKR040CYKR040C 504 nt9.92□□□□□ -0.82
RFU1Q08003 FMT1YBL013W 1206 nt9.86□□□□□ -0.83
RFU1Q08003 YCL042WYCL042W 360 nt9.86□□□□□ -0.83
RFU1Q08003 SOR2YDL246C 1074 nt9.84□□□□□ -0.83
RFU1Q08003 SOR1YJR159W 1074 nt9.84□□□□□ -0.83
RFU1Q08003 CWP1YKL096W 720 nt9.83□□□□□ -0.84
RFU1Q08003 BOP3YNL042W 1191 nt9.83□□□□□ -0.84
RFU1Q08003 PCM1YEL058W 1674 nt9.83□□□□□ -0.84
RFU1Q08003 RTF1YGL244W 1677 nt9.83□□□□□ -0.84
RFU1Q08003 MOT3YMR070W 1473 nt9.8□□□□□ -0.84
RFU1Q08003 SNF6YHL025W 999 nt9.79□□□□□ -0.84
RFU1Q08003 ADH2YMR303C 1047 nt9.79□□□□□ -0.84
RFU1Q08003 MCH5YOR306C 1566 nt9.79□□□□□ -0.84
RFU1Q08003 YJL225CYJL225C 5277 nt9.78□□□□□ -0.84
RFU1Q08003 FRD1YEL047C 1413 nt9.78□□□□□ -0.84
RFU1Q08003 RPM1RPM1 483 nt9.76□□□□□ -0.85
RFU1Q08003 PIB2YGL023C 1908 nt9.75□□□□□ -0.85
RFU1Q08003 SIM1YIL123W 1431 nt9.74□□□□□ -0.85
RFU1Q08003 BOR1YNL275W 1731 nt9.73□□□□□ -0.85
RFU1Q08003 LCB1YMR296C 1677 nt9.72□□□□□ -0.85
RFU1Q08003 NCP1YHR042W 2076 nt9.69□□□□□ -0.86
RFU1Q08003 BIO4YNR057C 714 nt9.68□□□□□ -0.86
RFU1Q08003 YIH1YCR059C 777 nt9.66□□□□□ -0.86
RFU1Q08003 SPP1YPL138C 1062 nt9.66□□□□□ -0.86
RFU1Q08003 RNQ1YCL028W 1218 nt9.65□□□□□ -0.86
RFU1Q08003 YLR235CYLR235C 399 nt9.62□□□□□ -0.87
RFU1Q08003 DIC1YLR348C 897 nt9.61□□□□□ -0.87
RFU1Q08003 PTK1YKL198C 1989 nt9.61□□□□□ -0.87
RFU1Q08003 PTH1YHR189W 573 nt9.6□□□□□ -0.87
RFU1Q08003 ERF2YLR246W 1080 nt9.59□□□□□ -0.87
RFU1Q08003 YLL053CYLL053C 459 nt9.58□□□□□ -0.88
RFU1Q08003 Q0182Q0182 405 nt9.57□□□□□ -0.88
RFU1Q08003 CRR1YLR213C 1269 nt9.53□□□□□ -0.88
RFU1Q08003 FTR1YER145C 1215 nt9.52□□□□□ -0.89
RFU1Q08003 YFL054CYFL054C 1941 nt9.51□□□□□ -0.89
RFU1Q08003 YKL030WYKL030W 606 nt9.51□□□□□ -0.89
RFU1Q08003 TIM23YNR017W 669 nt9.51□□□□□ -0.89
RFU1Q08003 LYS4YDR234W 2082 nt9.49□□□□□ -0.89
RFU1Q08003 YFL067WYFL067W 528 nt9.49□□□□□ -0.89
RFU1Q08003 AQY1YPR192W 918 nt9.49□□□□□ -0.89
RFU1Q08003 GAL1YBR020W 1587 nt9.47□□□□□ -0.89
RFU1Q08003 YLR179CYLR179C 606 nt9.47□□□□□ -0.89
RFU1Q08003 DDR2YOL052C-A 186 nt9.46□□□□□ -0.9
RFU1Q08003 TRM5YHR070W 1500 nt9.46□□□□□ -0.9
RFU1Q08003 ATF2YGR177C 1608 nt9.45□□□□□ -0.9
RFU1Q08003 HEM12YDR047W 1089 nt9.44□□□□□ -0.9
Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms