Protein–RNA interactions for Protein: Q06677

SWA2, Auxilin-like clathrin uncoating factor SWA2, yeastyeast

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWA2Q06677 IRC15YPL017C 1500 nt11.7□□□□□ -0.54
SWA2Q06677 YAL037C-BYAL037C-B 975 nt11.67□□□□□ -0.54
SWA2Q06677 SUF2tP(AGG)C 72 nt11.64□□□□□ -0.55
SWA2Q06677 SUF10tP(AGG)N 72 nt11.64□□□□□ -0.55
SWA2Q06677 GFD2YCL036W 1701 nt11.61□□□□□ -0.55
SWA2Q06677 SCC4YER147C 1875 nt11.6□□□□□ -0.55
SWA2Q06677 ART5YGR068C 1761 nt11.59□□□□□ -0.55
SWA2Q06677 MNP1YGL068W 585 nt11.59□□□□□ -0.55
SWA2Q06677 GIS3YLR094C 1509 nt11.59□□□□□ -0.55
SWA2Q06677 RKM5YLR137W 1104 nt11.53□□□□□ -0.56
SWA2Q06677 PET9YBL030C 957 nt11.49□□□□□ -0.57
SWA2Q06677 TIR4YOR009W 1464 nt11.47□□□□□ -0.57
SWA2Q06677 RTS2YOR077W 699 nt11.46□□□□□ -0.57
SWA2Q06677 PCH2YBR186W 1695 nt11.46□□□□□ -0.58
SWA2Q06677 MOT3YMR070W 1473 nt11.44□□□□□ -0.58
SWA2Q06677 YKL097CYKL097C 411 nt11.44□□□□□ -0.58
SWA2Q06677 GUT2YIL155C 1950 nt11.44□□□□□ -0.58
SWA2Q06677 SEC11YIR022W 504 nt11.41□□□□□ -0.58
SWA2Q06677 YCH1YGR203W 447 nt11.4□□□□□ -0.58
SWA2Q06677 CUE1YMR264W 612 nt11.39□□□□□ -0.59
SWA2Q06677 YHL050CYHL050C 2094 nt11.37□□□□□ -0.59
SWA2Q06677 PIB2YGL023C 1908 nt11.37□□□□□ -0.59
SWA2Q06677 NPL3YDR432W 1245 nt11.37□□□□□ -0.59
SWA2Q06677 YSC84YHR016C 1407 nt11.36□□□□□ -0.59
SWA2Q06677 YJL225CYJL225C 5277 nt11.35□□□□□ -0.59
SWA2Q06677 YMR057CYMR057C 372 nt11.32□□□□□ -0.6
SWA2Q06677 RRT12YCR045C 1476 nt11.27□□□□□ -0.6
SWA2Q06677 YOL037CYOL037C 354 nt11.23□□□□□ -0.61
SWA2Q06677 YLR154C-GYLR154C-G 150 nt11.22□□□□□ -0.61
SWA2Q06677 RPM1RPM1 483 nt11.22□□□□□ -0.61
SWA2Q06677 YOR139CYOR139C 393 nt11.17□□□□□ -0.62
SWA2Q06677 RTF1YGL244W 1677 nt11.15□□□□□ -0.62
SWA2Q06677 YIL100WYIL100W 354 nt11.15□□□□□ -0.62
SWA2Q06677 YJL152WYJL152W 360 nt11.11□□□□□ -0.63
SWA2Q06677 YLR236CYLR236C 324 nt11.11□□□□□ -0.63
SWA2Q06677 NCP1YHR042W 2076 nt11.1□□□□□ -0.63
SWA2Q06677 YNL195CYNL195C 786 nt11.08□□□□□ -0.64
SWA2Q06677 PTK1YKL198C 1989 nt11.07□□□□□ -0.64
SWA2Q06677 BOP3YNL042W 1191 nt11.05□□□□□ -0.64
SWA2Q06677 YLR281CYLR281C 468 nt11.04□□□□□ -0.64
SWA2Q06677 YCL048W-AYCL048W-A 240 nt11.04□□□□□ -0.64
SWA2Q06677 WHI5YOR083W 888 nt11.02□□□□□ -0.65
SWA2Q06677 RRD1YIL153W 1182 nt10.97□□□□□ -0.65
SWA2Q06677 RDN37-1RDN37-1 5354 nt10.94□□□□□ -0.66
SWA2Q06677 RDN37-2RDN37-2 5354 nt10.94□□□□□ -0.66
SWA2Q06677 LCB1YMR296C 1677 nt10.93□□□□□ -0.66
SWA2Q06677 DED1YOR204W 1815 nt10.91□□□□□ -0.66
SWA2Q06677 IDH1YNL037C 1083 nt10.85□□□□□ -0.67
SWA2Q06677 GBP2YCL011C 1284 nt10.84□□□□□ -0.67
SWA2Q06677 FMT1YBL013W 1206 nt10.83□□□□□ -0.68
SWA2Q06677 UME6YDR207C 2511 nt10.83□□□□□ -0.68
SWA2Q06677 FMP52YER004W 696 nt10.82□□□□□ -0.68
SWA2Q06677 YPR011CYPR011C 981 nt10.79□□□□□ -0.68
SWA2Q06677 PCM1YEL058W 1674 nt10.77□□□□□ -0.69
SWA2Q06677 LYS4YDR234W 2082 nt10.75□□□□□ -0.69
SWA2Q06677 PUS2YGL063W 1113 nt10.75□□□□□ -0.69
SWA2Q06677 DSK2YMR276W 1122 nt10.75□□□□□ -0.69
SWA2Q06677 TCD2YKL027W 1344 nt10.75□□□□□ -0.69
SWA2Q06677 tM(CAU)CtM(CAU)C 72 nt10.74□□□□□ -0.69
SWA2Q06677 IMT4tM(CAU)E 72 nt10.74□□□□□ -0.69
SWA2Q06677 IMT3tM(CAU)J3 72 nt10.74□□□□□ -0.69
SWA2Q06677 IMT1tM(CAU)O1 72 nt10.74□□□□□ -0.69
SWA2Q06677 IMT2tM(CAU)P 72 nt10.74□□□□□ -0.69
SWA2Q06677 IMP2'YIL154C 1041 nt10.74□□□□□ -0.69
SWA2Q06677 SPT8YLR055C 1809 nt10.73□□□□□ -0.69
SWA2Q06677 YFL054CYFL054C 1941 nt10.73□□□□□ -0.69
SWA2Q06677 ADH2YMR303C 1047 nt10.7□□□□□ -0.7
SWA2Q06677 FMP45YDL222C 930 nt10.69□□□□□ -0.7
SWA2Q06677 SIM1YIL123W 1431 nt10.68□□□□□ -0.7
SWA2Q06677 MXR2YCL033C 507 nt10.68□□□□□ -0.7
SWA2Q06677 SOR2YDL246C 1074 nt10.67□□□□□ -0.7
SWA2Q06677 SOR1YJR159W 1074 nt10.67□□□□□ -0.7
SWA2Q06677 BIO4YNR057C 714 nt10.67□□□□□ -0.7
SWA2Q06677 ERV46YAL042W 1248 nt10.64□□□□□ -0.71
SWA2Q06677 CWP1YKL096W 720 nt10.64□□□□□ -0.71
SWA2Q06677 YDR433WYDR433W 441 nt10.63□□□□□ -0.71
SWA2Q06677 FRE6YLL051C 2139 nt10.61□□□□□ -0.71
SWA2Q06677 SNF6YHL025W 999 nt10.61□□□□□ -0.71
SWA2Q06677 LPX1YOR084W 1164 nt10.61□□□□□ -0.71
SWA2Q06677 FRD1YEL047C 1413 nt10.58□□□□□ -0.72
SWA2Q06677 BOR1YNL275W 1731 nt10.57□□□□□ -0.72
SWA2Q06677 YIH1YCR059C 777 nt10.56□□□□□ -0.72
SWA2Q06677 SWE1YJL187C 2460 nt10.56□□□□□ -0.72
SWA2Q06677 YKR040CYKR040C 504 nt10.54□□□□□ -0.72
SWA2Q06677 CRR1YLR213C 1269 nt10.52□□□□□ -0.73
SWA2Q06677 YCL042WYCL042W 360 nt10.5□□□□□ -0.73
SWA2Q06677 ERF2YLR246W 1080 nt10.48□□□□□ -0.73
SWA2Q06677 RNQ1YCL028W 1218 nt10.48□□□□□ -0.73
SWA2Q06677 YLL053CYLL053C 459 nt10.47□□□□□ -0.73
SWA2Q06677 ATF2YGR177C 1608 nt10.44□□□□□ -0.74
SWA2Q06677 YHR056W-AYHR056W-A 435 nt10.43□□□□□ -0.74
SWA2Q06677 MIC10YCL057C-A 294 nt10.41□□□□□ -0.74
SWA2Q06677 FTR1YER145C 1215 nt10.37□□□□□ -0.75
SWA2Q06677 DIC1YLR348C 897 nt10.37□□□□□ -0.75
SWA2Q06677 SNG1YGR197C 1644 nt10.36□□□□□ -0.75
SWA2Q06677 SSN3YPL042C 1668 nt10.35□□□□□ -0.75
SWA2Q06677 GAL1YBR020W 1587 nt10.35□□□□□ -0.75
SWA2Q06677 HEM12YDR047W 1089 nt10.34□□□□□ -0.75
SWA2Q06677 HSP60YLR259C 1719 nt10.32□□□□□ -0.76
SWA2Q06677 TRM5YHR070W 1500 nt10.32□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms