Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 PTK1YKL198C 1989 nt8.79□□□□□ -1
LSM6Q06406 BDH2YAL061W 1254 nt8.74□□□□□ -1.01
LSM6Q06406 YER088W-BYER088W-B 147 nt8.73□□□□□ -1.01
LSM6Q06406 SIS1YNL007C 1059 nt8.73□□□□□ -1.01
LSM6Q06406 RRT12YCR045C 1476 nt8.7□□□□□ -1.02
LSM6Q06406 TRM9YML014W 840 nt8.69□□□□□ -1.02
LSM6Q06406 YNL195CYNL195C 786 nt8.69□□□□□ -1.02
LSM6Q06406 GFD2YCL036W 1701 nt8.68□□□□□ -1.02
LSM6Q06406 SUF2tP(AGG)C 72 nt8.66□□□□□ -1.02
LSM6Q06406 SUF10tP(AGG)N 72 nt8.66□□□□□ -1.02
LSM6Q06406 RTS2YOR077W 699 nt8.65□□□□□ -1.02
LSM6Q06406 CCT6YDR188W 1641 nt8.65□□□□□ -1.03
LSM6Q06406 ART5YGR068C 1761 nt8.63□□□□□ -1.03
LSM6Q06406 CUE1YMR264W 612 nt8.61□□□□□ -1.03
LSM6Q06406 YFL054CYFL054C 1941 nt8.6□□□□□ -1.03
LSM6Q06406 SPT8YLR055C 1809 nt8.59□□□□□ -1.03
LSM6Q06406 PET9YBL030C 957 nt8.58□□□□□ -1.04
LSM6Q06406 MCH5YOR306C 1566 nt8.56□□□□□ -1.04
LSM6Q06406 NCP1YHR042W 2076 nt8.55□□□□□ -1.04
LSM6Q06406 YIL100WYIL100W 354 nt8.54□□□□□ -1.04
LSM6Q06406 RSB1YOR049C 1065 nt8.53□□□□□ -1.04
LSM6Q06406 ALG12YNR030W 1656 nt8.51□□□□□ -1.05
LSM6Q06406 SRB2YHR041C 633 nt8.51□□□□□ -1.05
LSM6Q06406 LSM3YLR438C-A 270 nt8.5□□□□□ -1.05
LSM6Q06406 HSP60YLR259C 1719 nt8.49□□□□□ -1.05
LSM6Q06406 YCH1YGR203W 447 nt8.49□□□□□ -1.05
LSM6Q06406 YLR236CYLR236C 324 nt8.38□□□□□ -1.07
LSM6Q06406 SWE1YJL187C 2460 nt8.38□□□□□ -1.07
LSM6Q06406 GLK1YCL040W 1503 nt8.35□□□□□ -1.07
LSM6Q06406 TIR4YOR009W 1464 nt8.33□□□□□ -1.08
LSM6Q06406 YMR057CYMR057C 372 nt8.32□□□□□ -1.08
LSM6Q06406 WWM1YFL010C 636 nt8.31□□□□□ -1.08
LSM6Q06406 ATS1YAL020C 1002 nt8.31□□□□□ -1.08
LSM6Q06406 LCB1YMR296C 1677 nt8.29□□□□□ -1.08
LSM6Q06406 DSK2YMR276W 1122 nt8.28□□□□□ -1.08
LSM6Q06406 NAR1YNL240C 1476 nt8.26□□□□□ -1.09
LSM6Q06406 YFL021C-AYFL021C-A 855 nt8.24□□□□□ -1.09
LSM6Q06406 AAC1YMR056C 930 nt8.2□□□□□ -1.1
LSM6Q06406 FUR4YBR021W 1902 nt8.19□□□□□ -1.1
LSM6Q06406 PRP4YPR178W 1398 nt8.15□□□□□ -1.1
LSM6Q06406 BIO4YNR057C 714 nt8.15□□□□□ -1.1
LSM6Q06406 LYS4YDR234W 2082 nt8.12□□□□□ -1.11
LSM6Q06406 YEL076C-AYEL076C-A 651 nt8.12□□□□□ -1.11
LSM6Q06406 YEL076CYEL076C 651 nt8.12□□□□□ -1.11
LSM6Q06406 YGR021WYGR021W 873 nt8.12□□□□□ -1.11
LSM6Q06406 YLR464WYLR464W 651 nt8.12□□□□□ -1.11
LSM6Q06406 YCL048W-AYCL048W-A 240 nt8.1□□□□□ -1.11
LSM6Q06406 DPS1YLL018C 1674 nt8.1□□□□□ -1.11
LSM6Q06406 BMT6YLR063W 1098 nt8.07□□□□□ -1.12
LSM6Q06406 CYT2YKL087C 675 nt8.06□□□□□ -1.12
LSM6Q06406 SIM1YIL123W 1431 nt8.05□□□□□ -1.12
LSM6Q06406 CMP2YML057W 1815 nt8.05□□□□□ -1.12
LSM6Q06406 PBP1YGR178C 2169 nt8.03□□□□□ -1.12
LSM6Q06406 BIO5YNR056C 1686 nt8.03□□□□□ -1.12
LSM6Q06406 HOM6YJR139C 1080 nt8□□□□□ -1.13
LSM6Q06406 NPL3YDR432W 1245 nt7.96□□□□□ -1.14
LSM6Q06406 YJL152WYJL152W 360 nt7.96□□□□□ -1.14
LSM6Q06406 SNF1YDR477W 1902 nt7.95□□□□□ -1.14
LSM6Q06406 YKR005CYKR005C 1578 nt7.95□□□□□ -1.14
LSM6Q06406 FMP52YER004W 696 nt7.94□□□□□ -1.14
LSM6Q06406 YHR056W-AYHR056W-A 435 nt7.94□□□□□ -1.14
LSM6Q06406 CCA1YER168C 1641 nt7.93□□□□□ -1.14
LSM6Q06406 HSL7YBR133C 2484 nt7.92□□□□□ -1.14
LSM6Q06406 PCM1YEL058W 1674 nt7.92□□□□□ -1.14
LSM6Q06406 RKM5YLR137W 1104 nt7.89□□□□□ -1.15
LSM6Q06406 ERF2YLR246W 1080 nt7.89□□□□□ -1.15
LSM6Q06406 IRC24YIR036C 792 nt7.88□□□□□ -1.15
LSM6Q06406 RAX1YOR301W 1308 nt7.87□□□□□ -1.15
LSM6Q06406 PST2YDR032C 597 nt7.87□□□□□ -1.15
LSM6Q06406 YLR154C-GYLR154C-G 150 nt7.87□□□□□ -1.15
LSM6Q06406 CRR1YLR213C 1269 nt7.87□□□□□ -1.15
LSM6Q06406 WSC2YNL283C 1512 nt7.86□□□□□ -1.15
LSM6Q06406 NDI1YML120C 1542 nt7.85□□□□□ -1.15
LSM6Q06406 MNP1YGL068W 585 nt7.85□□□□□ -1.15
LSM6Q06406 YGR259CYGR259C 441 nt7.83□□□□□ -1.16
LSM6Q06406 RRD1YIL153W 1182 nt7.83□□□□□ -1.16
LSM6Q06406 HEM12YDR047W 1089 nt7.8□□□□□ -1.16
LSM6Q06406 SNF6YHL025W 999 nt7.79□□□□□ -1.16
LSM6Q06406 YAT1YAR035W 2064 nt7.77□□□□□ -1.17
LSM6Q06406 DED1YOR204W 1815 nt7.76□□□□□ -1.17
LSM6Q06406 YCL074WYCL074W 927 nt7.76□□□□□ -1.17
LSM6Q06406 HEL2YDR266C 1920 nt7.76□□□□□ -1.17
LSM6Q06406 RDN25-1RDN25-1 3396 nt7.76□□□□□ -1.17
LSM6Q06406 RDN25-2RDN25-2 3396 nt7.76□□□□□ -1.17
LSM6Q06406 MIC10YCL057C-A 294 nt7.74□□□□□ -1.17
LSM6Q06406 YAL037C-BYAL037C-B 975 nt7.72□□□□□ -1.17
LSM6Q06406 SPT20YOL148C 1815 nt7.71□□□□□ -1.17
LSM6Q06406 DUS1YML080W 1272 nt7.71□□□□□ -1.18
LSM6Q06406 ADH2YMR303C 1047 nt7.71□□□□□ -1.18
LSM6Q06406 CWP1YKL096W 720 nt7.7□□□□□ -1.18
LSM6Q06406 RPM1RPM1 483 nt7.7□□□□□ -1.18
LSM6Q06406 SNG1YGR197C 1644 nt7.7□□□□□ -1.18
LSM6Q06406 TCD2YKL027W 1344 nt7.68□□□□□ -1.18
LSM6Q06406 YFL067WYFL067W 528 nt7.67□□□□□ -1.18
LSM6Q06406 YLR281CYLR281C 468 nt7.67□□□□□ -1.18
LSM6Q06406 FMT1YBL013W 1206 nt7.67□□□□□ -1.18
LSM6Q06406 YIH1YCR059C 777 nt7.66□□□□□ -1.18
LSM6Q06406 ATF2YGR177C 1608 nt7.66□□□□□ -1.18
LSM6Q06406 SHU1YHL006C 453 nt7.65□□□□□ -1.18
LSM6Q06406 IMP2'YIL154C 1041 nt7.65□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 63.9 ms