Protein–RNA interactions for Protein: Q06217

SMD2, Small nuclear ribonucleoprotein Sm D2, yeastyeast

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD2Q06217 PUS2YGL063W 1113 nt13.87□□□□□ -0.19
SMD2Q06217 YLR154C-GYLR154C-G 150 nt13.87□□□□□ -0.19
SMD2Q06217 RPP2AYOL039W 321 nt13.85□□□□□ -0.19
SMD2Q06217 PTP1YDL230W 1008 nt13.84□□□□□ -0.19
SMD2Q06217 DCW1YKL046C 1350 nt13.76□□□□□ -0.21
SMD2Q06217 TIR4YOR009W 1464 nt13.72□□□□□ -0.21
SMD2Q06217 YCH1YGR203W 447 nt13.7□□□□□ -0.22
SMD2Q06217 YPR011CYPR011C 981 nt13.7□□□□□ -0.22
SMD2Q06217 CAC2YML102W 1407 nt13.68□□□□□ -0.22
SMD2Q06217 ART5YGR068C 1761 nt13.68□□□□□ -0.22
SMD2Q06217 YJL152WYJL152W 360 nt13.66□□□□□ -0.22
SMD2Q06217 DSK2YMR276W 1122 nt13.66□□□□□ -0.22
SMD2Q06217 YLR236CYLR236C 324 nt13.65□□□□□ -0.22
SMD2Q06217 IMP2'YIL154C 1041 nt13.64□□□□□ -0.23
SMD2Q06217 GFD2YCL036W 1701 nt13.63□□□□□ -0.23
SMD2Q06217 PET9YBL030C 957 nt13.62□□□□□ -0.23
SMD2Q06217 EMI2YDR516C 1503 nt13.59□□□□□ -0.23
SMD2Q06217 SSA4YER103W 1929 nt13.57□□□□□ -0.24
SMD2Q06217 YMR057CYMR057C 372 nt13.53□□□□□ -0.24
SMD2Q06217 FMP45YDL222C 930 nt13.52□□□□□ -0.25
SMD2Q06217 YDL221WYDL221W 552 nt13.5□□□□□ -0.25
SMD2Q06217 IRC15YPL017C 1500 nt13.49□□□□□ -0.25
SMD2Q06217 MOT3YMR070W 1473 nt13.48□□□□□ -0.25
SMD2Q06217 IDH1YNL037C 1083 nt13.48□□□□□ -0.25
SMD2Q06217 YMR090WYMR090W 684 nt13.43□□□□□ -0.26
SMD2Q06217 ERV46YAL042W 1248 nt13.41□□□□□ -0.26
SMD2Q06217 RTS2YOR077W 699 nt13.41□□□□□ -0.26
SMD2Q06217 LPX1YOR084W 1164 nt13.39□□□□□ -0.27
SMD2Q06217 GBP2YCL011C 1284 nt13.39□□□□□ -0.27
SMD2Q06217 FPS1YLL043W 2010 nt13.39□□□□□ -0.27
SMD2Q06217 YCL048W-AYCL048W-A 240 nt13.37□□□□□ -0.27
SMD2Q06217 GIS3YLR094C 1509 nt13.35□□□□□ -0.27
SMD2Q06217 CUE1YMR264W 612 nt13.33□□□□□ -0.28
SMD2Q06217 YDR433WYDR433W 441 nt13.32□□□□□ -0.28
SMD2Q06217 YBR220CYBR220C 1683 nt13.31□□□□□ -0.28
SMD2Q06217 SDH1YKL148C 1923 nt13.31□□□□□ -0.28
SMD2Q06217 YKR040CYKR040C 504 nt13.28□□□□□ -0.28
SMD2Q06217 MXR2YCL033C 507 nt13.26□□□□□ -0.29
SMD2Q06217 SCC4YER147C 1875 nt13.25□□□□□ -0.29
SMD2Q06217 RRD1YIL153W 1182 nt13.23□□□□□ -0.29
SMD2Q06217 DED1YOR204W 1815 nt13.22□□□□□ -0.29
SMD2Q06217 TCD2YKL027W 1344 nt13.21□□□□□ -0.29
SMD2Q06217 SPP1YPL138C 1062 nt13.19□□□□□ -0.3
SMD2Q06217 YIL100WYIL100W 354 nt13.1□□□□□ -0.31
SMD2Q06217 FMT1YBL013W 1206 nt13.1□□□□□ -0.31
SMD2Q06217 FRD1YEL047C 1413 nt13.06□□□□□ -0.32
SMD2Q06217 BDF1YLR399C 2061 nt13.05□□□□□ -0.32
SMD2Q06217 SOR2YDL246C 1074 nt13.01□□□□□ -0.33
SMD2Q06217 FMP52YER004W 696 nt13.01□□□□□ -0.33
SMD2Q06217 SOR1YJR159W 1074 nt13.01□□□□□ -0.33
SMD2Q06217 MRPL8YJL063C 717 nt12.99□□□□□ -0.33
SMD2Q06217 RTG1YOL067C 534 nt12.99□□□□□ -0.33
SMD2Q06217 YCL042WYCL042W 360 nt12.93□□□□□ -0.34
SMD2Q06217 RRT12YCR045C 1476 nt12.91□□□□□ -0.34
SMD2Q06217 YSC84YHR016C 1407 nt12.89□□□□□ -0.35
SMD2Q06217 TAT1YBR069C 1860 nt12.89□□□□□ -0.35
SMD2Q06217 YEL076C-AYEL076C-A 651 nt12.89□□□□□ -0.35
SMD2Q06217 YEL076CYEL076C 651 nt12.89□□□□□ -0.35
SMD2Q06217 CWP1YKL096W 720 nt12.89□□□□□ -0.35
SMD2Q06217 YLR464WYLR464W 651 nt12.89□□□□□ -0.35
SMD2Q06217 ADH2YMR303C 1047 nt12.89□□□□□ -0.35
SMD2Q06217 YHL050CYHL050C 2094 nt12.88□□□□□ -0.35
SMD2Q06217 YNL195CYNL195C 786 nt12.87□□□□□ -0.35
SMD2Q06217 PCM1YEL058W 1674 nt12.85□□□□□ -0.35
SMD2Q06217 ADO1YJR105W 1023 nt12.82□□□□□ -0.36
SMD2Q06217 PTH1YHR189W 573 nt12.8□□□□□ -0.36
SMD2Q06217 SEC11YIR022W 504 nt12.79□□□□□ -0.36
SMD2Q06217 YLR235CYLR235C 399 nt12.76□□□□□ -0.37
SMD2Q06217 SNF6YHL025W 999 nt12.75□□□□□ -0.37
SMD2Q06217 YKL030WYKL030W 606 nt12.72□□□□□ -0.37
SMD2Q06217 PCH2YBR186W 1695 nt12.7□□□□□ -0.38
SMD2Q06217 YIH1YCR059C 777 nt12.7□□□□□ -0.38
SMD2Q06217 LCB1YMR296C 1677 nt12.67□□□□□ -0.38
SMD2Q06217 HUA1YGR268C 597 nt12.67□□□□□ -0.38
SMD2Q06217 DIC1YLR348C 897 nt12.67□□□□□ -0.38
SMD2Q06217 RNQ1YCL028W 1218 nt12.67□□□□□ -0.38
SMD2Q06217 GUT2YIL155C 1950 nt12.64□□□□□ -0.39
SMD2Q06217 BIO4YNR057C 714 nt12.61□□□□□ -0.39
SMD2Q06217 TIM23YNR017W 669 nt12.6□□□□□ -0.39
SMD2Q06217 SIM1YIL123W 1431 nt12.59□□□□□ -0.39
SMD2Q06217 NCP1YHR042W 2076 nt12.55□□□□□ -0.4
SMD2Q06217 YLL053CYLL053C 459 nt12.55□□□□□ -0.4
SMD2Q06217 NVJ2YPR091C 2313 nt12.52□□□□□ -0.41
SMD2Q06217 PIB2YGL023C 1908 nt12.52□□□□□ -0.41
SMD2Q06217 YLR179CYLR179C 606 nt12.5□□□□□ -0.41
SMD2Q06217 UBX6YJL048C 1191 nt12.49□□□□□ -0.41
SMD2Q06217 FTR1YER145C 1215 nt12.48□□□□□ -0.41
SMD2Q06217 WSC2YNL283C 1512 nt12.47□□□□□ -0.41
SMD2Q06217 AHT1YHR093W 549 nt12.46□□□□□ -0.41
SMD2Q06217 RTF1YGL244W 1677 nt12.45□□□□□ -0.42
SMD2Q06217 GAL1YBR020W 1587 nt12.44□□□□□ -0.42
SMD2Q06217 BOP3YNL042W 1191 nt12.44□□□□□ -0.42
SMD2Q06217 AQY1YPR192W 918 nt12.42□□□□□ -0.42
SMD2Q06217 YDR094WYDR094W 336 nt12.41□□□□□ -0.42
SMD2Q06217 YPR064WYPR064W 420 nt12.41□□□□□ -0.42
SMD2Q06217 TRM5YHR070W 1500 nt12.39□□□□□ -0.43
SMD2Q06217 ERF2YLR246W 1080 nt12.39□□□□□ -0.43
SMD2Q06217 ATF2YGR177C 1608 nt12.38□□□□□ -0.43
SMD2Q06217 tL(GAG)GtL(GAG)G 82 nt12.38□□□□□ -0.43
SMD2Q06217 TAD3YLR316C 969 nt12.38□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms