Protein–RNA interactions for Protein: Q02939

TFB2, General transcription and DNA repair factor IIH subunit TFB2, yeastyeast

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFB2Q02939 PCH2YBR186W 1695 nt12.61□□□□□ -0.39
TFB2Q02939 YOR139CYOR139C 393 nt12.59□□□□□ -0.39
TFB2Q02939 CCT6YDR188W 1641 nt12.59□□□□□ -0.39
TFB2Q02939 GUT2YIL155C 1950 nt12.58□□□□□ -0.4
TFB2Q02939 RPP2AYOL039W 321 nt12.57□□□□□ -0.4
TFB2Q02939 SCC4YER147C 1875 nt12.55□□□□□ -0.4
TFB2Q02939 NVJ2YPR091C 2313 nt12.54□□□□□ -0.4
TFB2Q02939 NPL3YDR432W 1245 nt12.52□□□□□ -0.41
TFB2Q02939 SEC11YIR022W 504 nt12.51□□□□□ -0.41
TFB2Q02939 IRC15YPL017C 1500 nt12.51□□□□□ -0.41
TFB2Q02939 SUF2tP(AGG)C 72 nt12.5□□□□□ -0.41
TFB2Q02939 SUF10tP(AGG)N 72 nt12.5□□□□□ -0.41
TFB2Q02939 YOL037CYOL037C 354 nt12.48□□□□□ -0.41
TFB2Q02939 GIS3YLR094C 1509 nt12.44□□□□□ -0.42
TFB2Q02939 PIB2YGL023C 1908 nt12.43□□□□□ -0.42
TFB2Q02939 SIS1YNL007C 1059 nt12.41□□□□□ -0.42
TFB2Q02939 YSC84YHR016C 1407 nt12.35□□□□□ -0.43
TFB2Q02939 YHL050CYHL050C 2094 nt12.3□□□□□ -0.44
TFB2Q02939 GFD2YCL036W 1701 nt12.27□□□□□ -0.45
TFB2Q02939 ART5YGR068C 1761 nt12.25□□□□□ -0.45
TFB2Q02939 YLR154C-GYLR154C-G 150 nt12.24□□□□□ -0.45
TFB2Q02939 RTF1YGL244W 1677 nt12.23□□□□□ -0.45
TFB2Q02939 YLR281CYLR281C 468 nt12.22□□□□□ -0.45
TFB2Q02939 RTS2YOR077W 699 nt12.22□□□□□ -0.45
TFB2Q02939 WHI5YOR083W 888 nt12.22□□□□□ -0.45
TFB2Q02939 YJL152WYJL152W 360 nt12.2□□□□□ -0.46
TFB2Q02939 RRT12YCR045C 1476 nt12.2□□□□□ -0.46
TFB2Q02939 TIR4YOR009W 1464 nt12.2□□□□□ -0.46
TFB2Q02939 PET9YBL030C 957 nt12.16□□□□□ -0.46
TFB2Q02939 tM(CAU)CtM(CAU)C 72 nt12.12□□□□□ -0.47
TFB2Q02939 IMT4tM(CAU)E 72 nt12.12□□□□□ -0.47
TFB2Q02939 IMT3tM(CAU)J3 72 nt12.12□□□□□ -0.47
TFB2Q02939 IMT1tM(CAU)O1 72 nt12.12□□□□□ -0.47
TFB2Q02939 IMT2tM(CAU)P 72 nt12.12□□□□□ -0.47
TFB2Q02939 YCH1YGR203W 447 nt12.12□□□□□ -0.47
TFB2Q02939 PTK1YKL198C 1989 nt12.12□□□□□ -0.47
TFB2Q02939 PUS2YGL063W 1113 nt12.11□□□□□ -0.47
TFB2Q02939 YMR057CYMR057C 372 nt12.11□□□□□ -0.47
TFB2Q02939 BOP3YNL042W 1191 nt12.09□□□□□ -0.47
TFB2Q02939 CUE1YMR264W 612 nt12.08□□□□□ -0.48
TFB2Q02939 YNL195CYNL195C 786 nt11.98□□□□□ -0.49
TFB2Q02939 YCL048W-AYCL048W-A 240 nt11.95□□□□□ -0.5
TFB2Q02939 DSK2YMR276W 1122 nt11.94□□□□□ -0.5
TFB2Q02939 NCP1YHR042W 2076 nt11.92□□□□□ -0.5
TFB2Q02939 IDH1YNL037C 1083 nt11.92□□□□□ -0.5
TFB2Q02939 FPS1YLL043W 2010 nt11.91□□□□□ -0.5
TFB2Q02939 IMP2'YIL154C 1041 nt11.91□□□□□ -0.5
TFB2Q02939 YPR011CYPR011C 981 nt11.91□□□□□ -0.5
TFB2Q02939 YIL100WYIL100W 354 nt11.9□□□□□ -0.5
TFB2Q02939 YLR236CYLR236C 324 nt11.89□□□□□ -0.51
TFB2Q02939 GBP2YCL011C 1284 nt11.85□□□□□ -0.51
TFB2Q02939 YFL054CYFL054C 1941 nt11.81□□□□□ -0.52
TFB2Q02939 FMP45YDL222C 930 nt11.8□□□□□ -0.52
TFB2Q02939 BOR1YNL275W 1731 nt11.78□□□□□ -0.52
TFB2Q02939 YDR433WYDR433W 441 nt11.77□□□□□ -0.53
TFB2Q02939 SPT8YLR055C 1809 nt11.75□□□□□ -0.53
TFB2Q02939 LPX1YOR084W 1164 nt11.72□□□□□ -0.53
TFB2Q02939 TCD2YKL027W 1344 nt11.71□□□□□ -0.53
TFB2Q02939 UME6YDR207C 2511 nt11.71□□□□□ -0.53
TFB2Q02939 MXR2YCL033C 507 nt11.7□□□□□ -0.54
TFB2Q02939 RRD1YIL153W 1182 nt11.69□□□□□ -0.54
TFB2Q02939 ERV46YAL042W 1248 nt11.68□□□□□ -0.54
TFB2Q02939 LCB1YMR296C 1677 nt11.65□□□□□ -0.54
TFB2Q02939 DED1YOR204W 1815 nt11.65□□□□□ -0.54
TFB2Q02939 YKR040CYKR040C 504 nt11.63□□□□□ -0.55
TFB2Q02939 FMT1YBL013W 1206 nt11.57□□□□□ -0.56
TFB2Q02939 FMP52YER004W 696 nt11.53□□□□□ -0.56
TFB2Q02939 SWE1YJL187C 2460 nt11.52□□□□□ -0.57
TFB2Q02939 HSP60YLR259C 1719 nt11.49□□□□□ -0.57
TFB2Q02939 CWP1YKL096W 720 nt11.49□□□□□ -0.57
TFB2Q02939 SPP1YPL138C 1062 nt11.49□□□□□ -0.57
TFB2Q02939 YCL042WYCL042W 360 nt11.49□□□□□ -0.57
TFB2Q02939 FRD1YEL047C 1413 nt11.46□□□□□ -0.57
TFB2Q02939 ADH2YMR303C 1047 nt11.46□□□□□ -0.57
TFB2Q02939 PCM1YEL058W 1674 nt11.45□□□□□ -0.58
TFB2Q02939 LYS4YDR234W 2082 nt11.44□□□□□ -0.58
TFB2Q02939 SOR2YDL246C 1074 nt11.43□□□□□ -0.58
TFB2Q02939 SOR1YJR159W 1074 nt11.43□□□□□ -0.58
TFB2Q02939 MCH5YOR306C 1566 nt11.39□□□□□ -0.59
TFB2Q02939 ALG12YNR030W 1656 nt11.39□□□□□ -0.59
TFB2Q02939 SNF6YHL025W 999 nt11.38□□□□□ -0.59
TFB2Q02939 SIM1YIL123W 1431 nt11.35□□□□□ -0.59
TFB2Q02939 GLK1YCL040W 1503 nt11.33□□□□□ -0.6
TFB2Q02939 PTH1YHR189W 573 nt11.3□□□□□ -0.6
TFB2Q02939 YJL225CYJL225C 5277 nt11.26□□□□□ -0.61
TFB2Q02939 BIO4YNR057C 714 nt11.25□□□□□ -0.61
TFB2Q02939 YIH1YCR059C 777 nt11.23□□□□□ -0.61
TFB2Q02939 RNQ1YCL028W 1218 nt11.22□□□□□ -0.61
TFB2Q02939 FUR4YBR021W 1902 nt11.21□□□□□ -0.61
TFB2Q02939 DIC1YLR348C 897 nt11.21□□□□□ -0.61
TFB2Q02939 YLR235CYLR235C 399 nt11.2□□□□□ -0.62
TFB2Q02939 YLL053CYLL053C 459 nt11.18□□□□□ -0.62
TFB2Q02939 RTG1YOL067C 534 nt11.17□□□□□ -0.62
TFB2Q02939 YKL030WYKL030W 606 nt11.13□□□□□ -0.63
TFB2Q02939 TIM23YNR017W 669 nt11.11□□□□□ -0.63
TFB2Q02939 PRP4YPR178W 1398 nt11.09□□□□□ -0.63
TFB2Q02939 YEL076C-AYEL076C-A 651 nt11.08□□□□□ -0.64
TFB2Q02939 YEL076CYEL076C 651 nt11.08□□□□□ -0.64
TFB2Q02939 FTR1YER145C 1215 nt11.08□□□□□ -0.64
TFB2Q02939 YHR056W-AYHR056W-A 435 nt11.08□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 831.5 ms