Protein–RNA interactions for Protein: Q00723

PRP38, Pre-mRNA-splicing factor 38, yeastyeast

Predicted RBP Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP38Q00723 RKM5YLR137W 1104 nt12.06□□□□□ -0.48
PRP38Q00723 YOL037CYOL037C 354 nt12.06□□□□□ -0.48
PRP38Q00723 YBR220CYBR220C 1683 nt12.06□□□□□ -0.48
PRP38Q00723 SDH1YKL148C 1923 nt11.99□□□□□ -0.49
PRP38Q00723 ART5YGR068C 1761 nt11.97□□□□□ -0.49
PRP38Q00723 TAT1YBR069C 1860 nt11.95□□□□□ -0.5
PRP38Q00723 IRC15YPL017C 1500 nt11.94□□□□□ -0.5
PRP38Q00723 GFD2YCL036W 1701 nt11.94□□□□□ -0.5
PRP38Q00723 SCC4YER147C 1875 nt11.89□□□□□ -0.51
PRP38Q00723 PET9YBL030C 957 nt11.88□□□□□ -0.51
PRP38Q00723 GIS3YLR094C 1509 nt11.87□□□□□ -0.51
PRP38Q00723 TIR4YOR009W 1464 nt11.85□□□□□ -0.51
PRP38Q00723 RTS2YOR077W 699 nt11.85□□□□□ -0.51
PRP38Q00723 YCH1YGR203W 447 nt11.82□□□□□ -0.52
PRP38Q00723 YMR057CYMR057C 372 nt11.75□□□□□ -0.53
PRP38Q00723 YLR154C-GYLR154C-G 150 nt11.73□□□□□ -0.53
PRP38Q00723 CUE1YMR264W 612 nt11.73□□□□□ -0.53
PRP38Q00723 YJL152WYJL152W 360 nt11.72□□□□□ -0.53
PRP38Q00723 YLR281CYLR281C 468 nt11.71□□□□□ -0.53
PRP38Q00723 tM(CAU)CtM(CAU)C 72 nt11.7□□□□□ -0.54
PRP38Q00723 IMT4tM(CAU)E 72 nt11.7□□□□□ -0.54
PRP38Q00723 IMT3tM(CAU)J3 72 nt11.7□□□□□ -0.54
PRP38Q00723 IMT1tM(CAU)O1 72 nt11.7□□□□□ -0.54
PRP38Q00723 IMT2tM(CAU)P 72 nt11.7□□□□□ -0.54
PRP38Q00723 SEC11YIR022W 504 nt11.66□□□□□ -0.54
PRP38Q00723 WHI5YOR083W 888 nt11.65□□□□□ -0.54
PRP38Q00723 PCH2YBR186W 1695 nt11.63□□□□□ -0.55
PRP38Q00723 FPS1YLL043W 2010 nt11.62□□□□□ -0.55
PRP38Q00723 YSC84YHR016C 1407 nt11.62□□□□□ -0.55
PRP38Q00723 PUS2YGL063W 1113 nt11.61□□□□□ -0.55
PRP38Q00723 YIL100WYIL100W 354 nt11.6□□□□□ -0.55
PRP38Q00723 YCL048W-AYCL048W-A 240 nt11.58□□□□□ -0.56
PRP38Q00723 GUT2YIL155C 1950 nt11.57□□□□□ -0.56
PRP38Q00723 YLR236CYLR236C 324 nt11.56□□□□□ -0.56
PRP38Q00723 YHL050CYHL050C 2094 nt11.55□□□□□ -0.56
PRP38Q00723 YNL195CYNL195C 786 nt11.54□□□□□ -0.56
PRP38Q00723 RRT12YCR045C 1476 nt11.54□□□□□ -0.56
PRP38Q00723 IMP2'YIL154C 1041 nt11.51□□□□□ -0.57
PRP38Q00723 DSK2YMR276W 1122 nt11.45□□□□□ -0.58
PRP38Q00723 IDH1YNL037C 1083 nt11.41□□□□□ -0.58
PRP38Q00723 PIB2YGL023C 1908 nt11.37□□□□□ -0.59
PRP38Q00723 GBP2YCL011C 1284 nt11.36□□□□□ -0.59
PRP38Q00723 RTF1YGL244W 1677 nt11.35□□□□□ -0.59
PRP38Q00723 FMP45YDL222C 930 nt11.32□□□□□ -0.6
PRP38Q00723 RRD1YIL153W 1182 nt11.31□□□□□ -0.6
PRP38Q00723 BOP3YNL042W 1191 nt11.31□□□□□ -0.6
PRP38Q00723 MOT3YMR070W 1473 nt11.29□□□□□ -0.6
PRP38Q00723 YPR011CYPR011C 981 nt11.27□□□□□ -0.61
PRP38Q00723 TCD2YKL027W 1344 nt11.27□□□□□ -0.61
PRP38Q00723 DED1YOR204W 1815 nt11.24□□□□□ -0.61
PRP38Q00723 YDR433WYDR433W 441 nt11.21□□□□□ -0.61
PRP38Q00723 FMP52YER004W 696 nt11.21□□□□□ -0.61
PRP38Q00723 NCP1YHR042W 2076 nt11.2□□□□□ -0.62
PRP38Q00723 PAC11YDR488C 1602 nt11.19□□□□□ -0.62
PRP38Q00723 ERV46YAL042W 1248 nt11.18□□□□□ -0.62
PRP38Q00723 PTK1YKL198C 1989 nt11.17□□□□□ -0.62
PRP38Q00723 FMT1YBL013W 1206 nt11.16□□□□□ -0.62
PRP38Q00723 LCB1YMR296C 1677 nt11.15□□□□□ -0.62
PRP38Q00723 MXR2YCL033C 507 nt11.15□□□□□ -0.62
PRP38Q00723 PCM1YEL058W 1674 nt11.14□□□□□ -0.63
PRP38Q00723 LPX1YOR084W 1164 nt11.13□□□□□ -0.63
PRP38Q00723 CWP1YKL096W 720 nt11.1□□□□□ -0.63
PRP38Q00723 ADH2YMR303C 1047 nt11.09□□□□□ -0.63
PRP38Q00723 YKR040CYKR040C 504 nt11.08□□□□□ -0.64
PRP38Q00723 SIM1YIL123W 1431 nt11.08□□□□□ -0.64
PRP38Q00723 SNF6YHL025W 999 nt11.06□□□□□ -0.64
PRP38Q00723 SOR2YDL246C 1074 nt11.04□□□□□ -0.64
PRP38Q00723 SOR1YJR159W 1074 nt11.04□□□□□ -0.64
PRP38Q00723 YCL042WYCL042W 360 nt11.04□□□□□ -0.64
PRP38Q00723 BIO4YNR057C 714 nt10.99□□□□□ -0.65
PRP38Q00723 YFL054CYFL054C 1941 nt10.99□□□□□ -0.65
PRP38Q00723 FRD1YEL047C 1413 nt10.98□□□□□ -0.65
PRP38Q00723 MRPL8YJL063C 717 nt10.97□□□□□ -0.65
PRP38Q00723 LYS4YDR234W 2082 nt10.91□□□□□ -0.66
PRP38Q00723 YIH1YCR059C 777 nt10.9□□□□□ -0.66
PRP38Q00723 SPP1YPL138C 1062 nt10.9□□□□□ -0.66
PRP38Q00723 SPT8YLR055C 1809 nt10.88□□□□□ -0.67
PRP38Q00723 RNQ1YCL028W 1218 nt10.87□□□□□ -0.67
PRP38Q00723 ADO1YJR105W 1023 nt10.85□□□□□ -0.67
PRP38Q00723 YLL053CYLL053C 459 nt10.85□□□□□ -0.67
PRP38Q00723 ERF2YLR246W 1080 nt10.85□□□□□ -0.67
PRP38Q00723 YEL076C-AYEL076C-A 651 nt10.82□□□□□ -0.68
PRP38Q00723 YEL076CYEL076C 651 nt10.82□□□□□ -0.68
PRP38Q00723 YLR464WYLR464W 651 nt10.82□□□□□ -0.68
PRP38Q00723 CRR1YLR213C 1269 nt10.81□□□□□ -0.68
PRP38Q00723 DIC1YLR348C 897 nt10.8□□□□□ -0.68
PRP38Q00723 RTG1YOL067C 534 nt10.79□□□□□ -0.68
PRP38Q00723 FTR1YER145C 1215 nt10.75□□□□□ -0.69
PRP38Q00723 ATF2YGR177C 1608 nt10.75□□□□□ -0.69
PRP38Q00723 NVJ2YPR091C 2313 nt10.74□□□□□ -0.69
PRP38Q00723 PTH1YHR189W 573 nt10.73□□□□□ -0.69
PRP38Q00723 SWE1YJL187C 2460 nt10.72□□□□□ -0.69
PRP38Q00723 HEM12YDR047W 1089 nt10.72□□□□□ -0.69
PRP38Q00723 YFL067WYFL067W 528 nt10.72□□□□□ -0.69
PRP38Q00723 YLR235CYLR235C 399 nt10.71□□□□□ -0.69
PRP38Q00723 GAL1YBR020W 1587 nt10.71□□□□□ -0.69
PRP38Q00723 TRM5YHR070W 1500 nt10.7□□□□□ -0.7
PRP38Q00723 MIC10YCL057C-A 294 nt10.7□□□□□ -0.7
PRP38Q00723 HUA1YGR268C 597 nt10.68□□□□□ -0.7
PRP38Q00723 YHR056W-AYHR056W-A 435 nt10.68□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms