Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.63■□□□□ 0.25
SEC61GP60059 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61GP60059 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61GP60059 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.62■□□□□ 0.25
SEC61GP60059 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61GP60059 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEC61GP60059 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61GP60059 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61GP60059 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61GP60059 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61GP60059 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SEC61GP60059 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61GP60059 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61GP60059 AC135731.1-201ENST00000569415 2548 ntBASIC16.57■□□□□ 0.24
SEC61GP60059 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC16.57■□□□□ 0.24
SEC61GP60059 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61GP60059 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61GP60059 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61GP60059 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61GP60059 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SEC61GP60059 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SEC61GP60059 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SEC61GP60059 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61GP60059 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
SEC61GP60059 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61GP60059 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61GP60059 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61GP60059 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61GP60059 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61GP60059 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61GP60059 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SEC61GP60059 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61GP60059 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SEC61GP60059 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.37■□□□□ 0.21
SEC61GP60059 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61GP60059 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC61GP60059 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC61GP60059 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61GP60059 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC61GP60059 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC61GP60059 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC61GP60059 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61GP60059 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61GP60059 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SEC61GP60059 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61GP60059 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61GP60059 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SEC61GP60059 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SEC61GP60059 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61GP60059 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.25■□□□□ 0.19
SEC61GP60059 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.25■□□□□ 0.19
SEC61GP60059 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SEC61GP60059 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61GP60059 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SEC61GP60059 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC16.23■□□□□ 0.19
SEC61GP60059 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SEC61GP60059 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SEC61GP60059 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.21■□□□□ 0.19
SEC61GP60059 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SEC61GP60059 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
SEC61GP60059 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC16.2■□□□□ 0.18
SEC61GP60059 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC61GP60059 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SEC61GP60059 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC61GP60059 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
SEC61GP60059 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC61GP60059 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SEC61GP60059 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SEC61GP60059 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SEC61GP60059 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61GP60059 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61GP60059 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61GP60059 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SEC61GP60059 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SEC61GP60059 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61GP60059 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61GP60059 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61GP60059 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61GP60059 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61GP60059 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SEC61GP60059 ST7-202ENST00000323984 2142 ntTSL 5 BASIC16.1■□□□□ 0.17
SEC61GP60059 ST7-207ENST00000393449 2127 ntTSL 5 BASIC16.1■□□□□ 0.17
SEC61GP60059 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SEC61GP60059 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61GP60059 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.09■□□□□ 0.17
SEC61GP60059 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SEC61GP60059 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC16.08■□□□□ 0.16
SEC61GP60059 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61GP60059 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SEC61GP60059 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61GP60059 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61GP60059 ST7-205ENST00000393446 2114 ntTSL 5 BASIC16.05■□□□□ 0.16
SEC61GP60059 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61GP60059 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61GP60059 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SEC61GP60059 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SEC61GP60059 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SEC61GP60059 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SEC61GP60059 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC15.99■□□□□ 0.15
SEC61GP60059 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms