Protein–RNA interactions for Protein: P54730

UBX4, UBX domain-containing protein 4, yeastyeast

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBX4P54730 SUF2tP(AGG)C 72 nt12.51□□□□□ -0.41
UBX4P54730 SUF10tP(AGG)N 72 nt12.51□□□□□ -0.41
UBX4P54730 SCC4YER147C 1875 nt12.48□□□□□ -0.41
UBX4P54730 GFD2YCL036W 1701 nt12.47□□□□□ -0.41
UBX4P54730 GIS3YLR094C 1509 nt12.47□□□□□ -0.41
UBX4P54730 ART5YGR068C 1761 nt12.46□□□□□ -0.41
UBX4P54730 MNP1YGL068W 585 nt12.41□□□□□ -0.42
UBX4P54730 YKL097CYKL097C 411 nt12.36□□□□□ -0.43
UBX4P54730 RKM5YLR137W 1104 nt12.35□□□□□ -0.43
UBX4P54730 PET9YBL030C 957 nt12.35□□□□□ -0.43
UBX4P54730 PCH2YBR186W 1695 nt12.34□□□□□ -0.43
UBX4P54730 GUT2YIL155C 1950 nt12.31□□□□□ -0.44
UBX4P54730 RTS2YOR077W 699 nt12.31□□□□□ -0.44
UBX4P54730 TIR4YOR009W 1464 nt12.31□□□□□ -0.44
UBX4P54730 SEC11YIR022W 504 nt12.28□□□□□ -0.44
UBX4P54730 PIB2YGL023C 1908 nt12.24□□□□□ -0.45
UBX4P54730 YCH1YGR203W 447 nt12.24□□□□□ -0.45
UBX4P54730 YHL050CYHL050C 2094 nt12.23□□□□□ -0.45
UBX4P54730 CUE1YMR264W 612 nt12.23□□□□□ -0.45
UBX4P54730 YSC84YHR016C 1407 nt12.22□□□□□ -0.45
UBX4P54730 NPL3YDR432W 1245 nt12.19□□□□□ -0.46
UBX4P54730 YMR057CYMR057C 372 nt12.18□□□□□ -0.46
UBX4P54730 FPS1YLL043W 2010 nt12.16□□□□□ -0.46
UBX4P54730 RRT12YCR045C 1476 nt12.14□□□□□ -0.47
UBX4P54730 PAC11YDR488C 1602 nt12.05□□□□□ -0.48
UBX4P54730 YLR154C-GYLR154C-G 150 nt12.04□□□□□ -0.48
UBX4P54730 YOL037CYOL037C 354 nt12.01□□□□□ -0.49
UBX4P54730 RTF1YGL244W 1677 nt12□□□□□ -0.49
UBX4P54730 YIL100WYIL100W 354 nt11.98□□□□□ -0.49
UBX4P54730 YOR139CYOR139C 393 nt11.95□□□□□ -0.5
UBX4P54730 YJL152WYJL152W 360 nt11.94□□□□□ -0.5
UBX4P54730 YLR236CYLR236C 324 nt11.94□□□□□ -0.5
UBX4P54730 NCP1YHR042W 2076 nt11.94□□□□□ -0.5
UBX4P54730 PTK1YKL198C 1989 nt11.93□□□□□ -0.5
UBX4P54730 YNL195CYNL195C 786 nt11.93□□□□□ -0.5
UBX4P54730 BOP3YNL042W 1191 nt11.9□□□□□ -0.5
UBX4P54730 YCL048W-AYCL048W-A 240 nt11.86□□□□□ -0.51
UBX4P54730 YLR281CYLR281C 468 nt11.83□□□□□ -0.52
UBX4P54730 WHI5YOR083W 888 nt11.82□□□□□ -0.52
UBX4P54730 RRD1YIL153W 1182 nt11.77□□□□□ -0.53
UBX4P54730 LCB1YMR296C 1677 nt11.75□□□□□ -0.53
UBX4P54730 DED1YOR204W 1815 nt11.71□□□□□ -0.54
UBX4P54730 NVJ2YPR091C 2313 nt11.66□□□□□ -0.54
UBX4P54730 FMT1YBL013W 1206 nt11.64□□□□□ -0.55
UBX4P54730 IDH1YNL037C 1083 nt11.63□□□□□ -0.55
UBX4P54730 GBP2YCL011C 1284 nt11.63□□□□□ -0.55
UBX4P54730 FMP52YER004W 696 nt11.61□□□□□ -0.55
UBX4P54730 PCM1YEL058W 1674 nt11.57□□□□□ -0.56
UBX4P54730 YPR011CYPR011C 981 nt11.57□□□□□ -0.56
UBX4P54730 LYS4YDR234W 2082 nt11.56□□□□□ -0.56
UBX4P54730 YFL054CYFL054C 1941 nt11.56□□□□□ -0.56
UBX4P54730 SPT8YLR055C 1809 nt11.55□□□□□ -0.56
UBX4P54730 TCD2YKL027W 1344 nt11.55□□□□□ -0.56
UBX4P54730 PUS2YGL063W 1113 nt11.52□□□□□ -0.57
UBX4P54730 IMP2'YIL154C 1041 nt11.52□□□□□ -0.57
UBX4P54730 tM(CAU)CtM(CAU)C 72 nt11.51□□□□□ -0.57
UBX4P54730 IMT4tM(CAU)E 72 nt11.51□□□□□ -0.57
UBX4P54730 IMT3tM(CAU)J3 72 nt11.51□□□□□ -0.57
UBX4P54730 IMT1tM(CAU)O1 72 nt11.51□□□□□ -0.57
UBX4P54730 IMT2tM(CAU)P 72 nt11.51□□□□□ -0.57
UBX4P54730 DSK2YMR276W 1122 nt11.51□□□□□ -0.57
UBX4P54730 ADH2YMR303C 1047 nt11.49□□□□□ -0.57
UBX4P54730 SIM1YIL123W 1431 nt11.48□□□□□ -0.57
UBX4P54730 FMP45YDL222C 930 nt11.47□□□□□ -0.57
UBX4P54730 MXR2YCL033C 507 nt11.46□□□□□ -0.57
UBX4P54730 BIO4YNR057C 714 nt11.45□□□□□ -0.58
UBX4P54730 SOR2YDL246C 1074 nt11.44□□□□□ -0.58
UBX4P54730 SOR1YJR159W 1074 nt11.44□□□□□ -0.58
UBX4P54730 YJL225CYJL225C 5277 nt11.44□□□□□ -0.58
UBX4P54730 CWP1YKL096W 720 nt11.43□□□□□ -0.58
UBX4P54730 YDR433WYDR433W 441 nt11.4□□□□□ -0.58
UBX4P54730 ERV46YAL042W 1248 nt11.4□□□□□ -0.58
UBX4P54730 SNF6YHL025W 999 nt11.39□□□□□ -0.59
UBX4P54730 LPX1YOR084W 1164 nt11.36□□□□□ -0.59
UBX4P54730 SWE1YJL187C 2460 nt11.35□□□□□ -0.59
UBX4P54730 FRD1YEL047C 1413 nt11.34□□□□□ -0.59
UBX4P54730 YIH1YCR059C 777 nt11.33□□□□□ -0.6
UBX4P54730 YKR040CYKR040C 504 nt11.31□□□□□ -0.6
UBX4P54730 CRR1YLR213C 1269 nt11.28□□□□□ -0.6
UBX4P54730 YCL042WYCL042W 360 nt11.27□□□□□ -0.61
UBX4P54730 ERF2YLR246W 1080 nt11.26□□□□□ -0.61
UBX4P54730 RNQ1YCL028W 1218 nt11.26□□□□□ -0.61
UBX4P54730 YLL053CYLL053C 459 nt11.25□□□□□ -0.61
UBX4P54730 ATF2YGR177C 1608 nt11.21□□□□□ -0.61
UBX4P54730 YHR056W-AYHR056W-A 435 nt11.18□□□□□ -0.62
UBX4P54730 MIC10YCL057C-A 294 nt11.18□□□□□ -0.62
UBX4P54730 BOR1YNL275W 1731 nt11.17□□□□□ -0.62
UBX4P54730 FTR1YER145C 1215 nt11.14□□□□□ -0.63
UBX4P54730 SNG1YGR197C 1644 nt11.13□□□□□ -0.63
UBX4P54730 HEM12YDR047W 1089 nt11.11□□□□□ -0.63
UBX4P54730 HSP60YLR259C 1719 nt11.11□□□□□ -0.63
UBX4P54730 GAL1YBR020W 1587 nt11.11□□□□□ -0.63
UBX4P54730 DIC1YLR348C 897 nt11.1□□□□□ -0.63
UBX4P54730 RPM1RPM1 483 nt11.09□□□□□ -0.63
UBX4P54730 TRM5YHR070W 1500 nt11.09□□□□□ -0.63
UBX4P54730 YFL067WYFL067W 528 nt11.08□□□□□ -0.64
UBX4P54730 RDN37-1RDN37-1 5354 nt11.07□□□□□ -0.64
UBX4P54730 RDN37-2RDN37-2 5354 nt11.07□□□□□ -0.64
UBX4P54730 CCA1YER168C 1641 nt11.05□□□□□ -0.64
UBX4P54730 RAX1YOR301W 1308 nt11.03□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms