Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 IMT4tM(CAU)E 72 nt11.22□□□□□ -0.61
CUZ1P53899 IMT3tM(CAU)J3 72 nt11.22□□□□□ -0.61
CUZ1P53899 IMT1tM(CAU)O1 72 nt11.22□□□□□ -0.61
CUZ1P53899 IMT2tM(CAU)P 72 nt11.22□□□□□ -0.61
CUZ1P53899 MEP2YNL142W 1500 nt11.21□□□□□ -0.61
CUZ1P53899 WHI5YOR083W 888 nt11.2□□□□□ -0.62
CUZ1P53899 ARO7YPR060C 771 nt11.19□□□□□ -0.62
CUZ1P53899 SIS1YNL007C 1059 nt11.17□□□□□ -0.62
CUZ1P53899 SSA4YER103W 1929 nt11.17□□□□□ -0.62
CUZ1P53899 PUS2YGL063W 1113 nt11.15□□□□□ -0.62
CUZ1P53899 YLR154C-GYLR154C-G 150 nt11.15□□□□□ -0.62
CUZ1P53899 RPP2AYOL039W 321 nt11.13□□□□□ -0.63
CUZ1P53899 YJL152WYJL152W 360 nt11.04□□□□□ -0.64
CUZ1P53899 PTP1YDL230W 1008 nt11.03□□□□□ -0.64
CUZ1P53899 PAM17YKR065C 594 nt11.02□□□□□ -0.65
CUZ1P53899 DCW1YKL046C 1350 nt11.02□□□□□ -0.65
CUZ1P53899 IMP2'YIL154C 1041 nt11.01□□□□□ -0.65
CUZ1P53899 DSK2YMR276W 1122 nt11□□□□□ -0.65
CUZ1P53899 TIR4YOR009W 1464 nt10.99□□□□□ -0.65
CUZ1P53899 YCH1YGR203W 447 nt10.98□□□□□ -0.65
CUZ1P53899 ART5YGR068C 1761 nt10.98□□□□□ -0.65
CUZ1P53899 PET9YBL030C 957 nt10.95□□□□□ -0.66
CUZ1P53899 CAC2YML102W 1407 nt10.92□□□□□ -0.66
CUZ1P53899 GFD2YCL036W 1701 nt10.92□□□□□ -0.66
CUZ1P53899 EMI2YDR516C 1503 nt10.9□□□□□ -0.66
CUZ1P53899 YLR236CYLR236C 324 nt10.9□□□□□ -0.66
CUZ1P53899 IDH1YNL037C 1083 nt10.89□□□□□ -0.67
CUZ1P53899 REG2YBR050C 1017 nt10.89□□□□□ -0.67
CUZ1P53899 YMR090WYMR090W 684 nt10.87□□□□□ -0.67
CUZ1P53899 YPR011CYPR011C 981 nt10.87□□□□□ -0.67
CUZ1P53899 FMP45YDL222C 930 nt10.86□□□□□ -0.67
CUZ1P53899 YMR057CYMR057C 372 nt10.86□□□□□ -0.67
CUZ1P53899 YDL221WYDL221W 552 nt10.83□□□□□ -0.68
CUZ1P53899 YCL048W-AYCL048W-A 240 nt10.82□□□□□ -0.68
CUZ1P53899 RTS2YOR077W 699 nt10.77□□□□□ -0.69
CUZ1P53899 GBP2YCL011C 1284 nt10.77□□□□□ -0.69
CUZ1P53899 IRC15YPL017C 1500 nt10.77□□□□□ -0.69
CUZ1P53899 BDF1YLR399C 2061 nt10.74□□□□□ -0.69
CUZ1P53899 YDR433WYDR433W 441 nt10.74□□□□□ -0.69
CUZ1P53899 ERV46YAL042W 1248 nt10.74□□□□□ -0.69
CUZ1P53899 YBR220CYBR220C 1683 nt10.73□□□□□ -0.69
CUZ1P53899 LPX1YOR084W 1164 nt10.72□□□□□ -0.69
CUZ1P53899 FPS1YLL043W 2010 nt10.7□□□□□ -0.7
CUZ1P53899 GIS3YLR094C 1509 nt10.69□□□□□ -0.7
CUZ1P53899 CUE1YMR264W 612 nt10.69□□□□□ -0.7
CUZ1P53899 SDH1YKL148C 1923 nt10.68□□□□□ -0.7
CUZ1P53899 BUR6YER159C 429 nt10.68□□□□□ -0.7
CUZ1P53899 TCD2YKL027W 1344 nt10.65□□□□□ -0.7
CUZ1P53899 YDR509WYDR509W 348 nt10.65□□□□□ -0.7
CUZ1P53899 YKR040CYKR040C 504 nt10.65□□□□□ -0.7
CUZ1P53899 SCC4YER147C 1875 nt10.64□□□□□ -0.71
CUZ1P53899 MXR2YCL033C 507 nt10.61□□□□□ -0.71
CUZ1P53899 TAT1YBR069C 1860 nt10.6□□□□□ -0.71
CUZ1P53899 BMT5YIL096C 1011 nt10.59□□□□□ -0.71
CUZ1P53899 YIL100WYIL100W 354 nt10.59□□□□□ -0.71
CUZ1P53899 RRD1YIL153W 1182 nt10.57□□□□□ -0.72
CUZ1P53899 Q0010Q0010 387 nt10.56□□□□□ -0.72
CUZ1P53899 VAR1Q0140 1197 nt10.55□□□□□ -0.72
CUZ1P53899 DED1YOR204W 1815 nt10.55□□□□□ -0.72
CUZ1P53899 SPP1YPL138C 1062 nt10.51□□□□□ -0.73
CUZ1P53899 FMP52YER004W 696 nt10.47□□□□□ -0.73
CUZ1P53899 YCL042WYCL042W 360 nt10.45□□□□□ -0.74
CUZ1P53899 FRD1YEL047C 1413 nt10.43□□□□□ -0.74
CUZ1P53899 MRPL8YJL063C 717 nt10.43□□□□□ -0.74
CUZ1P53899 FMT1YBL013W 1206 nt10.43□□□□□ -0.74
CUZ1P53899 YNL195CYNL195C 786 nt10.43□□□□□ -0.74
CUZ1P53899 SOR2YDL246C 1074 nt10.42□□□□□ -0.74
CUZ1P53899 SOR1YJR159W 1074 nt10.42□□□□□ -0.74
CUZ1P53899 ARA2YMR041C 1008 nt10.41□□□□□ -0.74
CUZ1P53899 Q0144Q0144 330 nt10.4□□□□□ -0.74
CUZ1P53899 YIR018C-AYIR018C-A 138 nt10.4□□□□□ -0.74
CUZ1P53899 SRN2YLR119W 642 nt10.39□□□□□ -0.75
CUZ1P53899 SEC11YIR022W 504 nt10.37□□□□□ -0.75
CUZ1P53899 YSC84YHR016C 1407 nt10.36□□□□□ -0.75
CUZ1P53899 CWP1YKL096W 720 nt10.36□□□□□ -0.75
CUZ1P53899 YEL076C-AYEL076C-A 651 nt10.34□□□□□ -0.75
CUZ1P53899 YEL076CYEL076C 651 nt10.34□□□□□ -0.75
CUZ1P53899 YLR464WYLR464W 651 nt10.34□□□□□ -0.75
CUZ1P53899 RTG1YOL067C 534 nt10.34□□□□□ -0.75
CUZ1P53899 ADO1YJR105W 1023 nt10.33□□□□□ -0.76
CUZ1P53899 PCH2YBR186W 1695 nt10.33□□□□□ -0.76
CUZ1P53899 RRT12YCR045C 1476 nt10.32□□□□□ -0.76
CUZ1P53899 SEM1YDR363W-A 270 nt10.32□□□□□ -0.76
CUZ1P53899 YEL009C-AYEL009C-A 408 nt10.32□□□□□ -0.76
CUZ1P53899 ADH2YMR303C 1047 nt10.31□□□□□ -0.76
CUZ1P53899 PCM1YEL058W 1674 nt10.31□□□□□ -0.76
CUZ1P53899 YHL050CYHL050C 2094 nt10.3□□□□□ -0.76
CUZ1P53899 SNF6YHL025W 999 nt10.28□□□□□ -0.76
CUZ1P53899 YLR235CYLR235C 399 nt10.28□□□□□ -0.76
CUZ1P53899 GUT2YIL155C 1950 nt10.28□□□□□ -0.76
CUZ1P53899 PTH1YHR189W 573 nt10.27□□□□□ -0.77
CUZ1P53899 MET8YBR213W 825 nt10.26□□□□□ -0.77
CUZ1P53899 YLR122CYLR122C 378 nt10.25□□□□□ -0.77
CUZ1P53899 YKL030WYKL030W 606 nt10.22□□□□□ -0.77
CUZ1P53899 HUA1YGR268C 597 nt10.21□□□□□ -0.77
CUZ1P53899 ABZ2YMR289W 1125 nt10.2□□□□□ -0.78
CUZ1P53899 DIC1YLR348C 897 nt10.18□□□□□ -0.78
CUZ1P53899 RNQ1YCL028W 1218 nt10.17□□□□□ -0.78
CUZ1P53899 YIH1YCR059C 777 nt10.16□□□□□ -0.78
CUZ1P53899 LCB1YMR296C 1677 nt10.15□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms