Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 EMI2YDR516C 1503 nt10.18□□□□□ -0.78
SSU72P53538 SIS1YNL007C 1059 nt10.14□□□□□ -0.79
SSU72P53538 YDL221WYDL221W 552 nt10.11□□□□□ -0.79
SSU72P53538 PTP1YDL230W 1008 nt10.11□□□□□ -0.79
SSU72P53538 MNP1YGL068W 585 nt10.08□□□□□ -0.8
SSU72P53538 RKM5YLR137W 1104 nt10.08□□□□□ -0.8
SSU72P53538 CAC2YML102W 1407 nt10.06□□□□□ -0.8
SSU72P53538 YBR220CYBR220C 1683 nt10.03□□□□□ -0.8
SSU72P53538 SDH1YKL148C 1923 nt10□□□□□ -0.81
SSU72P53538 YCH1YGR203W 447 nt9.97□□□□□ -0.81
SSU72P53538 ART5YGR068C 1761 nt9.96□□□□□ -0.81
SSU72P53538 PET9YBL030C 957 nt9.96□□□□□ -0.82
SSU72P53538 YOL037CYOL037C 354 nt9.95□□□□□ -0.82
SSU72P53538 GFD2YCL036W 1701 nt9.94□□□□□ -0.82
SSU72P53538 RDN37-1RDN37-1 5354 nt9.93□□□□□ -0.82
SSU72P53538 RDN37-2RDN37-2 5354 nt9.93□□□□□ -0.82
SSU72P53538 SCC4YER147C 1875 nt9.93□□□□□ -0.82
SSU72P53538 IRC15YPL017C 1500 nt9.92□□□□□ -0.82
SSU72P53538 GIS3YLR094C 1509 nt9.87□□□□□ -0.83
SSU72P53538 NPL3YDR432W 1245 nt9.85□□□□□ -0.83
SSU72P53538 TIR4YOR009W 1464 nt9.85□□□□□ -0.83
SSU72P53538 RTS2YOR077W 699 nt9.84□□□□□ -0.83
SSU72P53538 SEC11YIR022W 504 nt9.82□□□□□ -0.84
SSU72P53538 YJL152WYJL152W 360 nt9.81□□□□□ -0.84
SSU72P53538 YLR154C-GYLR154C-G 150 nt9.81□□□□□ -0.84
SSU72P53538 CUE1YMR264W 612 nt9.8□□□□□ -0.84
SSU72P53538 YMR057CYMR057C 372 nt9.78□□□□□ -0.84
SSU72P53538 YIL100WYIL100W 354 nt9.75□□□□□ -0.85
SSU72P53538 YOR139CYOR139C 393 nt9.75□□□□□ -0.85
SSU72P53538 YLR236CYLR236C 324 nt9.73□□□□□ -0.85
SSU72P53538 YNL195CYNL195C 786 nt9.73□□□□□ -0.85
SSU72P53538 BOR1YNL275W 1731 nt9.73□□□□□ -0.85
SSU72P53538 YCL048W-AYCL048W-A 240 nt9.72□□□□□ -0.85
SSU72P53538 PCH2YBR186W 1695 nt9.71□□□□□ -0.86
SSU72P53538 YSC84YHR016C 1407 nt9.68□□□□□ -0.86
SSU72P53538 WHI5YOR083W 888 nt9.67□□□□□ -0.86
SSU72P53538 YLR281CYLR281C 468 nt9.66□□□□□ -0.86
SSU72P53538 MCH5YOR306C 1566 nt9.65□□□□□ -0.86
SSU72P53538 GUT2YIL155C 1950 nt9.63□□□□□ -0.87
SSU72P53538 IDH1YNL037C 1083 nt9.59□□□□□ -0.87
SSU72P53538 YHL050CYHL050C 2094 nt9.59□□□□□ -0.87
SSU72P53538 IMP2'YIL154C 1041 nt9.58□□□□□ -0.88
SSU72P53538 RRT12YCR045C 1476 nt9.57□□□□□ -0.88
SSU72P53538 GBP2YCL011C 1284 nt9.51□□□□□ -0.89
SSU72P53538 PUS2YGL063W 1113 nt9.49□□□□□ -0.89
SSU72P53538 BOP3YNL042W 1191 nt9.49□□□□□ -0.89
SSU72P53538 RTF1YGL244W 1677 nt9.48□□□□□ -0.89
SSU72P53538 DSK2YMR276W 1122 nt9.47□□□□□ -0.89
SSU72P53538 TCD2YKL027W 1344 nt9.47□□□□□ -0.89
SSU72P53538 MOT3YMR070W 1473 nt9.45□□□□□ -0.9
SSU72P53538 FMP52YER004W 696 nt9.44□□□□□ -0.9
SSU72P53538 tM(CAU)CtM(CAU)C 72 nt9.42□□□□□ -0.9
SSU72P53538 IMT4tM(CAU)E 72 nt9.42□□□□□ -0.9
SSU72P53538 IMT3tM(CAU)J3 72 nt9.42□□□□□ -0.9
SSU72P53538 IMT1tM(CAU)O1 72 nt9.42□□□□□ -0.9
SSU72P53538 IMT2tM(CAU)P 72 nt9.42□□□□□ -0.9
SSU72P53538 RRD1YIL153W 1182 nt9.4□□□□□ -0.9
SSU72P53538 PIB2YGL023C 1908 nt9.4□□□□□ -0.9
SSU72P53538 YDR433WYDR433W 441 nt9.38□□□□□ -0.91
SSU72P53538 FRE6YLL051C 2139 nt9.34□□□□□ -0.91
SSU72P53538 ALG12YNR030W 1656 nt9.33□□□□□ -0.92
SSU72P53538 DED1YOR204W 1815 nt9.31□□□□□ -0.92
SSU72P53538 PCM1YEL058W 1674 nt9.29□□□□□ -0.92
SSU72P53538 FMP45YDL222C 930 nt9.29□□□□□ -0.92
SSU72P53538 YCL042WYCL042W 360 nt9.29□□□□□ -0.92
SSU72P53538 SSN3YPL042C 1668 nt9.29□□□□□ -0.92
SSU72P53538 NCP1YHR042W 2076 nt9.28□□□□□ -0.92
SSU72P53538 ERV46YAL042W 1248 nt9.27□□□□□ -0.93
SSU72P53538 SIM1YIL123W 1431 nt9.27□□□□□ -0.93
SSU72P53538 PTK1YKL198C 1989 nt9.26□□□□□ -0.93
SSU72P53538 SNF6YHL025W 999 nt9.26□□□□□ -0.93
SSU72P53538 CWP1YKL096W 720 nt9.26□□□□□ -0.93
SSU72P53538 LCB1YMR296C 1677 nt9.26□□□□□ -0.93
SSU72P53538 YKR040CYKR040C 504 nt9.25□□□□□ -0.93
SSU72P53538 YPR011CYPR011C 981 nt9.25□□□□□ -0.93
SSU72P53538 FMT1YBL013W 1206 nt9.24□□□□□ -0.93
SSU72P53538 MXR2YCL033C 507 nt9.24□□□□□ -0.93
SSU72P53538 SOR2YDL246C 1074 nt9.23□□□□□ -0.93
SSU72P53538 SOR1YJR159W 1074 nt9.23□□□□□ -0.93
SSU72P53538 ADH2YMR303C 1047 nt9.22□□□□□ -0.93
SSU72P53538 LPX1YOR084W 1164 nt9.21□□□□□ -0.94
SSU72P53538 YFL054CYFL054C 1941 nt9.17□□□□□ -0.94
SSU72P53538 BIO4YNR057C 714 nt9.15□□□□□ -0.94
SSU72P53538 FRD1YEL047C 1413 nt9.13□□□□□ -0.95
SSU72P53538 ERF2YLR246W 1080 nt9.12□□□□□ -0.95
SSU72P53538 YIH1YCR059C 777 nt9.11□□□□□ -0.95
SSU72P53538 RNQ1YCL028W 1218 nt9.1□□□□□ -0.95
SSU72P53538 GID7YCL039W 2238 nt9.09□□□□□ -0.95
SSU72P53538 SPT8YLR055C 1809 nt9.07□□□□□ -0.96
SSU72P53538 LYS4YDR234W 2082 nt9.05□□□□□ -0.96
SSU72P53538 YLL053CYLL053C 459 nt9.05□□□□□ -0.96
SSU72P53538 BSP1YPR171W 1731 nt9.05□□□□□ -0.96
SSU72P53538 CRR1YLR213C 1269 nt9.03□□□□□ -0.96
SSU72P53538 DIC1YLR348C 897 nt9.02□□□□□ -0.97
SSU72P53538 YFL067WYFL067W 528 nt9.01□□□□□ -0.97
SSU72P53538 HSP60YLR259C 1719 nt9.01□□□□□ -0.97
SSU72P53538 NAR1YNL240C 1476 nt9□□□□□ -0.97
SSU72P53538 YLR235CYLR235C 399 nt8.99□□□□□ -0.97
SSU72P53538 HEM12YDR047W 1089 nt8.98□□□□□ -0.97
SSU72P53538 FTR1YER145C 1215 nt8.98□□□□□ -0.97
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms