Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 IMT1tM(CAU)O1 72 nt11.5□□□□□ -0.57
SPT20P50875 IMT2tM(CAU)P 72 nt11.5□□□□□ -0.57
SPT20P50875 YLR281CYLR281C 468 nt11.49□□□□□ -0.57
SPT20P50875 EMI2YDR516C 1503 nt11.45□□□□□ -0.58
SPT20P50875 YMR090WYMR090W 684 nt11.45□□□□□ -0.58
SPT20P50875 WHI5YOR083W 888 nt11.44□□□□□ -0.58
SPT20P50875 Q0182Q0182 405 nt11.42□□□□□ -0.58
SPT20P50875 RPP2AYOL039W 321 nt11.42□□□□□ -0.58
SPT20P50875 NVJ2YPR091C 2313 nt11.41□□□□□ -0.58
SPT20P50875 PUS2YGL063W 1113 nt11.41□□□□□ -0.58
SPT20P50875 PTP1YDL230W 1008 nt11.38□□□□□ -0.59
SPT20P50875 YDL221WYDL221W 552 nt11.37□□□□□ -0.59
SPT20P50875 YLR154C-GYLR154C-G 150 nt11.36□□□□□ -0.59
SPT20P50875 YBR220CYBR220C 1683 nt11.34□□□□□ -0.59
SPT20P50875 SIS1YNL007C 1059 nt11.34□□□□□ -0.59
SPT20P50875 CAC2YML102W 1407 nt11.33□□□□□ -0.6
SPT20P50875 SDH1YKL148C 1923 nt11.28□□□□□ -0.6
SPT20P50875 IMP2'YIL154C 1041 nt11.25□□□□□ -0.61
SPT20P50875 YJL152WYJL152W 360 nt11.24□□□□□ -0.61
SPT20P50875 MOT3YMR070W 1473 nt11.24□□□□□ -0.61
SPT20P50875 DSK2YMR276W 1122 nt11.22□□□□□ -0.61
SPT20P50875 YPR011CYPR011C 981 nt11.18□□□□□ -0.62
SPT20P50875 IRC15YPL017C 1500 nt11.18□□□□□ -0.62
SPT20P50875 SCC4YER147C 1875 nt11.16□□□□□ -0.62
SPT20P50875 TIR4YOR009W 1464 nt11.15□□□□□ -0.62
SPT20P50875 YCH1YGR203W 447 nt11.15□□□□□ -0.62
SPT20P50875 ART5YGR068C 1761 nt11.15□□□□□ -0.62
SPT20P50875 GFD2YCL036W 1701 nt11.14□□□□□ -0.63
SPT20P50875 YLR236CYLR236C 324 nt11.13□□□□□ -0.63
SPT20P50875 PET9YBL030C 957 nt11.12□□□□□ -0.63
SPT20P50875 FMP45YDL222C 930 nt11.11□□□□□ -0.63
SPT20P50875 GIS3YLR094C 1509 nt11.1□□□□□ -0.63
SPT20P50875 IDH1YNL037C 1083 nt11.1□□□□□ -0.63
SPT20P50875 SEC11YIR022W 504 nt11.04□□□□□ -0.64
SPT20P50875 YMR057CYMR057C 372 nt11.03□□□□□ -0.64
SPT20P50875 RTS2YOR077W 699 nt11.02□□□□□ -0.65
SPT20P50875 YCL048W-AYCL048W-A 240 nt10.99□□□□□ -0.65
SPT20P50875 PCH2YBR186W 1695 nt10.98□□□□□ -0.65
SPT20P50875 ERV46YAL042W 1248 nt10.97□□□□□ -0.65
SPT20P50875 CUE1YMR264W 612 nt10.97□□□□□ -0.65
SPT20P50875 GBP2YCL011C 1284 nt10.97□□□□□ -0.65
SPT20P50875 YDR433WYDR433W 441 nt10.95□□□□□ -0.66
SPT20P50875 GUT2YIL155C 1950 nt10.94□□□□□ -0.66
SPT20P50875 LPX1YOR084W 1164 nt10.94□□□□□ -0.66
SPT20P50875 YJL225CYJL225C 5277 nt10.94□□□□□ -0.66
SPT20P50875 YSC84YHR016C 1407 nt10.91□□□□□ -0.66
SPT20P50875 YKR040CYKR040C 504 nt10.88□□□□□ -0.67
SPT20P50875 FPS1YLL043W 2010 nt10.85□□□□□ -0.67
SPT20P50875 YIL100WYIL100W 354 nt10.85□□□□□ -0.67
SPT20P50875 YHL050CYHL050C 2094 nt10.85□□□□□ -0.67
SPT20P50875 TCD2YKL027W 1344 nt10.84□□□□□ -0.67
SPT20P50875 YNL195CYNL195C 786 nt10.83□□□□□ -0.68
SPT20P50875 MXR2YCL033C 507 nt10.82□□□□□ -0.68
SPT20P50875 SPP1YPL138C 1062 nt10.81□□□□□ -0.68
SPT20P50875 RRT12YCR045C 1476 nt10.78□□□□□ -0.68
SPT20P50875 PIB2YGL023C 1908 nt10.77□□□□□ -0.69
SPT20P50875 RRD1YIL153W 1182 nt10.75□□□□□ -0.69
SPT20P50875 DED1YOR204W 1815 nt10.72□□□□□ -0.69
SPT20P50875 MRPL8YJL063C 717 nt10.72□□□□□ -0.69
SPT20P50875 RTF1YGL244W 1677 nt10.71□□□□□ -0.69
SPT20P50875 BOP3YNL042W 1191 nt10.67□□□□□ -0.7
SPT20P50875 RDN37-1RDN37-1 5354 nt10.65□□□□□ -0.7
SPT20P50875 RDN37-2RDN37-2 5354 nt10.65□□□□□ -0.7
SPT20P50875 FMP52YER004W 696 nt10.64□□□□□ -0.71
SPT20P50875 YCL042WYCL042W 360 nt10.64□□□□□ -0.71
SPT20P50875 FRD1YEL047C 1413 nt10.64□□□□□ -0.71
SPT20P50875 RTG1YOL067C 534 nt10.63□□□□□ -0.71
SPT20P50875 ADO1YJR105W 1023 nt10.62□□□□□ -0.71
SPT20P50875 SOR2YDL246C 1074 nt10.61□□□□□ -0.71
SPT20P50875 SOR1YJR159W 1074 nt10.61□□□□□ -0.71
SPT20P50875 FMT1YBL013W 1206 nt10.61□□□□□ -0.71
SPT20P50875 UME6YDR207C 2511 nt10.6□□□□□ -0.71
SPT20P50875 YEL076C-AYEL076C-A 651 nt10.6□□□□□ -0.71
SPT20P50875 YEL076CYEL076C 651 nt10.6□□□□□ -0.71
SPT20P50875 YLR464WYLR464W 651 nt10.6□□□□□ -0.71
SPT20P50875 NCP1YHR042W 2076 nt10.54□□□□□ -0.72
SPT20P50875 CWP1YKL096W 720 nt10.53□□□□□ -0.72
SPT20P50875 PTK1YKL198C 1989 nt10.53□□□□□ -0.72
SPT20P50875 YLR235CYLR235C 399 nt10.5□□□□□ -0.73
SPT20P50875 ADH2YMR303C 1047 nt10.49□□□□□ -0.73
SPT20P50875 BOR1YNL275W 1731 nt10.48□□□□□ -0.73
SPT20P50875 PTH1YHR189W 573 nt10.48□□□□□ -0.73
SPT20P50875 YGR139WYGR139W 339 nt10.46□□□□□ -0.73
SPT20P50875 HUA1YGR268C 597 nt10.46□□□□□ -0.73
SPT20P50875 PCM1YEL058W 1674 nt10.46□□□□□ -0.74
SPT20P50875 SNF6YHL025W 999 nt10.44□□□□□ -0.74
SPT20P50875 YKL030WYKL030W 606 nt10.44□□□□□ -0.74
SPT20P50875 LCB1YMR296C 1677 nt10.44□□□□□ -0.74
SPT20P50875 DIC1YLR348C 897 nt10.36□□□□□ -0.75
SPT20P50875 UBX6YJL048C 1191 nt10.35□□□□□ -0.75
SPT20P50875 YIH1YCR059C 777 nt10.34□□□□□ -0.75
SPT20P50875 RNQ1YCL028W 1218 nt10.34□□□□□ -0.75
SPT20P50875 SIM1YIL123W 1431 nt10.33□□□□□ -0.76
SPT20P50875 YFL054CYFL054C 1941 nt10.33□□□□□ -0.76
SPT20P50875 TIM23YNR017W 669 nt10.33□□□□□ -0.76
SPT20P50875 SPT8YLR055C 1809 nt10.27□□□□□ -0.77
SPT20P50875 YLR179CYLR179C 606 nt10.26□□□□□ -0.77
SPT20P50875 NME1NME1 340 nt10.26□□□□□ -0.77
SPT20P50875 BIO4YNR057C 714 nt10.25□□□□□ -0.77
SPT20P50875 MCH5YOR306C 1566 nt10.24□□□□□ -0.77
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms