Protein–RNA interactions for Protein: P48237

CCM1, Mitochondrial group I intron splicing factor CCM1, yeastyeast

Predicted RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCM1P48237 WHI5YOR083W 888 nt13.43□□□□□ -0.26
CCM1P48237 CAC2YML102W 1407 nt13.42□□□□□ -0.26
CCM1P48237 tM(CAU)CtM(CAU)C 72 nt13.41□□□□□ -0.26
CCM1P48237 IMT4tM(CAU)E 72 nt13.41□□□□□ -0.26
CCM1P48237 IMT3tM(CAU)J3 72 nt13.41□□□□□ -0.26
CCM1P48237 IMT1tM(CAU)O1 72 nt13.41□□□□□ -0.26
CCM1P48237 IMT2tM(CAU)P 72 nt13.41□□□□□ -0.26
CCM1P48237 YLR154C-GYLR154C-G 150 nt13.39□□□□□ -0.27
CCM1P48237 BDF1YLR399C 2061 nt13.35□□□□□ -0.27
CCM1P48237 PUS2YGL063W 1113 nt13.33□□□□□ -0.28
CCM1P48237 YDL221WYDL221W 552 nt13.31□□□□□ -0.28
CCM1P48237 YMR090WYMR090W 684 nt13.28□□□□□ -0.28
CCM1P48237 YBR220CYBR220C 1683 nt13.28□□□□□ -0.28
CCM1P48237 ART5YGR068C 1761 nt13.27□□□□□ -0.28
CCM1P48237 TIR4YOR009W 1464 nt13.27□□□□□ -0.29
CCM1P48237 YJL152WYJL152W 360 nt13.26□□□□□ -0.29
CCM1P48237 YCH1YGR203W 447 nt13.22□□□□□ -0.29
CCM1P48237 PET9YBL030C 957 nt13.22□□□□□ -0.29
CCM1P48237 GFD2YCL036W 1701 nt13.22□□□□□ -0.29
CCM1P48237 IRC15YPL017C 1500 nt13.21□□□□□ -0.29
CCM1P48237 SDH1YKL148C 1923 nt13.21□□□□□ -0.3
CCM1P48237 TAT1YBR069C 1860 nt13.14□□□□□ -0.31
CCM1P48237 IMP2'YIL154C 1041 nt13.14□□□□□ -0.31
CCM1P48237 DSK2YMR276W 1122 nt13.14□□□□□ -0.31
CCM1P48237 PAC11YDR488C 1602 nt13.13□□□□□ -0.31
CCM1P48237 YMR057CYMR057C 372 nt13.13□□□□□ -0.31
CCM1P48237 GIS3YLR094C 1509 nt13.13□□□□□ -0.31
CCM1P48237 RTS2YOR077W 699 nt13.12□□□□□ -0.31
CCM1P48237 SCC4YER147C 1875 nt13.1□□□□□ -0.31
CCM1P48237 YPR011CYPR011C 981 nt13.09□□□□□ -0.31
CCM1P48237 YLR236CYLR236C 324 nt13.08□□□□□ -0.32
CCM1P48237 NVJ2YPR091C 2313 nt13.06□□□□□ -0.32
CCM1P48237 IDH1YNL037C 1083 nt13.04□□□□□ -0.32
CCM1P48237 MOT3YMR070W 1473 nt13.03□□□□□ -0.32
CCM1P48237 FPS1YLL043W 2010 nt13.01□□□□□ -0.33
CCM1P48237 YCL048W-AYCL048W-A 240 nt13□□□□□ -0.33
CCM1P48237 FMP45YDL222C 930 nt12.98□□□□□ -0.33
CCM1P48237 CUE1YMR264W 612 nt12.94□□□□□ -0.34
CCM1P48237 GBP2YCL011C 1284 nt12.94□□□□□ -0.34
CCM1P48237 YDR433WYDR433W 441 nt12.87□□□□□ -0.35
CCM1P48237 ERV46YAL042W 1248 nt12.87□□□□□ -0.35
CCM1P48237 LPX1YOR084W 1164 nt12.87□□□□□ -0.35
CCM1P48237 YSC84YHR016C 1407 nt12.82□□□□□ -0.36
CCM1P48237 TCD2YKL027W 1344 nt12.79□□□□□ -0.36
CCM1P48237 YHL050CYHL050C 2094 nt12.78□□□□□ -0.36
CCM1P48237 PCH2YBR186W 1695 nt12.78□□□□□ -0.36
CCM1P48237 YIL100WYIL100W 354 nt12.78□□□□□ -0.36
CCM1P48237 YKR040CYKR040C 504 nt12.78□□□□□ -0.36
CCM1P48237 MXR2YCL033C 507 nt12.77□□□□□ -0.37
CCM1P48237 RRD1YIL153W 1182 nt12.76□□□□□ -0.37
CCM1P48237 RRT12YCR045C 1476 nt12.76□□□□□ -0.37
CCM1P48237 SEC11YIR022W 504 nt12.74□□□□□ -0.37
CCM1P48237 DED1YOR204W 1815 nt12.74□□□□□ -0.37
CCM1P48237 GUT2YIL155C 1950 nt12.73□□□□□ -0.37
CCM1P48237 YNL195CYNL195C 786 nt12.64□□□□□ -0.39
CCM1P48237 FMT1YBL013W 1206 nt12.62□□□□□ -0.39
CCM1P48237 SPP1YPL138C 1062 nt12.62□□□□□ -0.39
CCM1P48237 FMP52YER004W 696 nt12.6□□□□□ -0.39
CCM1P48237 PIB2YGL023C 1908 nt12.59□□□□□ -0.39
CCM1P48237 MRPL8YJL063C 717 nt12.57□□□□□ -0.4
CCM1P48237 FRD1YEL047C 1413 nt12.56□□□□□ -0.4
CCM1P48237 SOR2YDL246C 1074 nt12.54□□□□□ -0.4
CCM1P48237 SOR1YJR159W 1074 nt12.54□□□□□ -0.4
CCM1P48237 YCL042WYCL042W 360 nt12.54□□□□□ -0.4
CCM1P48237 CWP1YKL096W 720 nt12.49□□□□□ -0.41
CCM1P48237 RTF1YGL244W 1677 nt12.48□□□□□ -0.41
CCM1P48237 ADH2YMR303C 1047 nt12.46□□□□□ -0.41
CCM1P48237 PCM1YEL058W 1674 nt12.45□□□□□ -0.42
CCM1P48237 NCP1YHR042W 2076 nt12.41□□□□□ -0.42
CCM1P48237 BOP3YNL042W 1191 nt12.39□□□□□ -0.43
CCM1P48237 ADO1YJR105W 1023 nt12.38□□□□□ -0.43
CCM1P48237 RTG1YOL067C 534 nt12.38□□□□□ -0.43
CCM1P48237 SNF6YHL025W 999 nt12.37□□□□□ -0.43
CCM1P48237 LCB1YMR296C 1677 nt12.36□□□□□ -0.43
CCM1P48237 PTH1YHR189W 573 nt12.34□□□□□ -0.43
CCM1P48237 PTK1YKL198C 1989 nt12.34□□□□□ -0.43
CCM1P48237 YEL076C-AYEL076C-A 651 nt12.32□□□□□ -0.44
CCM1P48237 YEL076CYEL076C 651 nt12.32□□□□□ -0.44
CCM1P48237 YLR464WYLR464W 651 nt12.32□□□□□ -0.44
CCM1P48237 YLR235CYLR235C 399 nt12.31□□□□□ -0.44
CCM1P48237 YIH1YCR059C 777 nt12.26□□□□□ -0.45
CCM1P48237 RNQ1YCL028W 1218 nt12.25□□□□□ -0.45
CCM1P48237 SIM1YIL123W 1431 nt12.25□□□□□ -0.45
CCM1P48237 YKL030WYKL030W 606 nt12.24□□□□□ -0.45
CCM1P48237 DIC1YLR348C 897 nt12.24□□□□□ -0.45
CCM1P48237 BIO4YNR057C 714 nt12.22□□□□□ -0.45
CCM1P48237 HUA1YGR268C 597 nt12.16□□□□□ -0.46
CCM1P48237 TIM23YNR017W 669 nt12.16□□□□□ -0.46
CCM1P48237 YLL053CYLL053C 459 nt12.15□□□□□ -0.46
CCM1P48237 UBX6YJL048C 1191 nt12.13□□□□□ -0.47
CCM1P48237 LYS4YDR234W 2082 nt12.11□□□□□ -0.47
CCM1P48237 YLR179CYLR179C 606 nt12.1□□□□□ -0.47
CCM1P48237 YFL054CYFL054C 1941 nt12.08□□□□□ -0.48
CCM1P48237 FTR1YER145C 1215 nt12.07□□□□□ -0.48
CCM1P48237 ERF2YLR246W 1080 nt12.03□□□□□ -0.48
CCM1P48237 GAL1YBR020W 1587 nt12.03□□□□□ -0.48
CCM1P48237 AQY1YPR192W 918 nt12.01□□□□□ -0.49
CCM1P48237 YPR064WYPR064W 420 nt12□□□□□ -0.49
CCM1P48237 TRM5YHR070W 1500 nt12□□□□□ -0.49
CCM1P48237 AHT1YHR093W 549 nt11.99□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms