Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 PIB2YGL023C 1908 nt10.8□□□□□ -0.68
LSM1P47017 WWM1YFL010C 636 nt10.78□□□□□ -0.68
LSM1P47017 RTF1YGL244W 1677 nt10.76□□□□□ -0.69
LSM1P47017 SIS1YNL007C 1059 nt10.76□□□□□ -0.69
LSM1P47017 PST2YDR032C 597 nt10.75□□□□□ -0.69
LSM1P47017 YSC84YHR016C 1407 nt10.73□□□□□ -0.69
LSM1P47017 IRC15YPL017C 1500 nt10.7□□□□□ -0.7
LSM1P47017 BOR1YNL275W 1731 nt10.7□□□□□ -0.7
LSM1P47017 YFL021C-AYFL021C-A 855 nt10.66□□□□□ -0.7
LSM1P47017 GIS3YLR094C 1509 nt10.65□□□□□ -0.7
LSM1P47017 YGR021WYGR021W 873 nt10.65□□□□□ -0.7
LSM1P47017 BOP3YNL042W 1191 nt10.65□□□□□ -0.7
LSM1P47017 ART5YGR068C 1761 nt10.62□□□□□ -0.71
LSM1P47017 GFD2YCL036W 1701 nt10.62□□□□□ -0.71
LSM1P47017 RTS2YOR077W 699 nt10.6□□□□□ -0.71
LSM1P47017 YHL050CYHL050C 2094 nt10.59□□□□□ -0.71
LSM1P47017 PET9YBL030C 957 nt10.58□□□□□ -0.72
LSM1P47017 PTK1YKL198C 1989 nt10.56□□□□□ -0.72
LSM1P47017 YCH1YGR203W 447 nt10.53□□□□□ -0.72
LSM1P47017 HOM6YJR139C 1080 nt10.51□□□□□ -0.73
LSM1P47017 YNL195CYNL195C 786 nt10.51□□□□□ -0.73
LSM1P47017 CUE1YMR264W 612 nt10.5□□□□□ -0.73
LSM1P47017 RDN37-1RDN37-1 5354 nt10.49□□□□□ -0.73
LSM1P47017 RDN37-2RDN37-2 5354 nt10.49□□□□□ -0.73
LSM1P47017 YIL100WYIL100W 354 nt10.46□□□□□ -0.73
LSM1P47017 RRT12YCR045C 1476 nt10.46□□□□□ -0.74
LSM1P47017 SHU1YHL006C 453 nt10.44□□□□□ -0.74
LSM1P47017 TIR4YOR009W 1464 nt10.42□□□□□ -0.74
LSM1P47017 YAL037C-BYAL037C-B 975 nt10.42□□□□□ -0.74
LSM1P47017 MCH5YOR306C 1566 nt10.42□□□□□ -0.74
LSM1P47017 MNP1YGL068W 585 nt10.4□□□□□ -0.74
LSM1P47017 RKM5YLR137W 1104 nt10.38□□□□□ -0.75
LSM1P47017 YMR057CYMR057C 372 nt10.38□□□□□ -0.75
LSM1P47017 YFL054CYFL054C 1941 nt10.37□□□□□ -0.75
LSM1P47017 YLR236CYLR236C 324 nt10.35□□□□□ -0.75
LSM1P47017 SPT8YLR055C 1809 nt10.31□□□□□ -0.76
LSM1P47017 Q0182Q0182 405 nt10.31□□□□□ -0.76
LSM1P47017 YJL152WYJL152W 360 nt10.27□□□□□ -0.77
LSM1P47017 ALG12YNR030W 1656 nt10.25□□□□□ -0.77
LSM1P47017 YCL048W-AYCL048W-A 240 nt10.25□□□□□ -0.77
LSM1P47017 NCP1YHR042W 2076 nt10.24□□□□□ -0.77
LSM1P47017 HSP60YLR259C 1719 nt10.22□□□□□ -0.77
LSM1P47017 NPL3YDR432W 1245 nt10.2□□□□□ -0.78
LSM1P47017 YLR154C-GYLR154C-G 150 nt10.19□□□□□ -0.78
LSM1P47017 RPM1RPM1 483 nt10.18□□□□□ -0.78
LSM1P47017 YKL097CYKL097C 411 nt10.17□□□□□ -0.78
LSM1P47017 YOL037CYOL037C 354 nt10.1□□□□□ -0.79
LSM1P47017 GLK1YCL040W 1503 nt10.07□□□□□ -0.8
LSM1P47017 SWE1YJL187C 2460 nt10.06□□□□□ -0.8
LSM1P47017 DSK2YMR276W 1122 nt9.98□□□□□ -0.81
LSM1P47017 LCB1YMR296C 1677 nt9.97□□□□□ -0.81
LSM1P47017 NAR1YNL240C 1476 nt9.96□□□□□ -0.82
LSM1P47017 IDH1YNL037C 1083 nt9.95□□□□□ -0.82
LSM1P47017 FMP52YER004W 696 nt9.93□□□□□ -0.82
LSM1P47017 GBP2YCL011C 1284 nt9.9□□□□□ -0.82
LSM1P47017 SIM1YIL123W 1431 nt9.9□□□□□ -0.83
LSM1P47017 WHI5YOR083W 888 nt9.89□□□□□ -0.83
LSM1P47017 RRD1YIL153W 1182 nt9.88□□□□□ -0.83
LSM1P47017 AAC1YMR056C 930 nt9.88□□□□□ -0.83
LSM1P47017 TCD2YKL027W 1344 nt9.87□□□□□ -0.83
LSM1P47017 PCM1YEL058W 1674 nt9.85□□□□□ -0.83
LSM1P47017 FUR4YBR021W 1902 nt9.84□□□□□ -0.83
LSM1P47017 YLR281CYLR281C 468 nt9.82□□□□□ -0.84
LSM1P47017 PRP4YPR178W 1398 nt9.82□□□□□ -0.84
LSM1P47017 SNF6YHL025W 999 nt9.79□□□□□ -0.84
LSM1P47017 BIO4YNR057C 714 nt9.78□□□□□ -0.84
LSM1P47017 YEL076C-AYEL076C-A 651 nt9.77□□□□□ -0.85
LSM1P47017 YEL076CYEL076C 651 nt9.77□□□□□ -0.85
LSM1P47017 YLR464WYLR464W 651 nt9.77□□□□□ -0.85
LSM1P47017 CWP1YKL096W 720 nt9.76□□□□□ -0.85
LSM1P47017 DED1YOR204W 1815 nt9.75□□□□□ -0.85
LSM1P47017 DPS1YLL018C 1674 nt9.75□□□□□ -0.85
LSM1P47017 IMP2'YIL154C 1041 nt9.75□□□□□ -0.85
LSM1P47017 YOR139CYOR139C 393 nt9.75□□□□□ -0.85
LSM1P47017 LYS4YDR234W 2082 nt9.72□□□□□ -0.85
LSM1P47017 BMT6YLR063W 1098 nt9.72□□□□□ -0.85
LSM1P47017 ADH2YMR303C 1047 nt9.72□□□□□ -0.85
LSM1P47017 CMP2YML057W 1815 nt9.72□□□□□ -0.85
LSM1P47017 ERF2YLR246W 1080 nt9.71□□□□□ -0.86
LSM1P47017 FMT1YBL013W 1206 nt9.71□□□□□ -0.86
LSM1P47017 CYT2YKL087C 675 nt9.7□□□□□ -0.86
LSM1P47017 YDR433WYDR433W 441 nt9.69□□□□□ -0.86
LSM1P47017 YCL042WYCL042W 360 nt9.68□□□□□ -0.86
LSM1P47017 HSL7YBR133C 2484 nt9.67□□□□□ -0.86
LSM1P47017 BIO5YNR056C 1686 nt9.66□□□□□ -0.86
LSM1P47017 PBP1YGR178C 2169 nt9.64□□□□□ -0.87
LSM1P47017 SOR2YDL246C 1074 nt9.63□□□□□ -0.87
LSM1P47017 SOR1YJR159W 1074 nt9.63□□□□□ -0.87
LSM1P47017 CRR1YLR213C 1269 nt9.63□□□□□ -0.87
LSM1P47017 PUS2YGL063W 1113 nt9.62□□□□□ -0.87
LSM1P47017 YIH1YCR059C 777 nt9.6□□□□□ -0.87
LSM1P47017 HEM12YDR047W 1089 nt9.59□□□□□ -0.87
LSM1P47017 YHR056W-AYHR056W-A 435 nt9.59□□□□□ -0.87
LSM1P47017 MXR2YCL033C 507 nt9.59□□□□□ -0.87
LSM1P47017 YLL053CYLL053C 459 nt9.57□□□□□ -0.88
LSM1P47017 RNQ1YCL028W 1218 nt9.56□□□□□ -0.88
LSM1P47017 RAX1YOR301W 1308 nt9.56□□□□□ -0.88
LSM1P47017 YKR005CYKR005C 1578 nt9.55□□□□□ -0.88
LSM1P47017 SNF1YDR477W 1902 nt9.55□□□□□ -0.88
LSM1P47017 FMP45YDL222C 930 nt9.55□□□□□ -0.88
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms