Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPL13AP40429 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.01■□□□□ 0.79
RPL13AP40429 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.01■□□□□ 0.79
RPL13AP40429 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.01■□□□□ 0.79
RPL13AP40429 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPL13AP40429 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RPL13AP40429 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPL13AP40429 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPL13AP40429 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RPL13AP40429 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RPL13AP40429 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPL13AP40429 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RPL13AP40429 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPL13AP40429 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPL13AP40429 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPL13AP40429 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.92■□□□□ 0.78
RPL13AP40429 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.91■□□□□ 0.78
RPL13AP40429 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL13AP40429 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPL13AP40429 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPL13AP40429 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RPL13AP40429 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPL13AP40429 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.85■□□□□ 0.77
RPL13AP40429 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPL13AP40429 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPL13AP40429 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL13AP40429 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RPL13AP40429 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.83■□□□□ 0.76
RPL13AP40429 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPL13AP40429 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPL13AP40429 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.79■□□□□ 0.76
RPL13AP40429 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPL13AP40429 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
RPL13AP40429 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL13AP40429 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
RPL13AP40429 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL13AP40429 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.72■□□□□ 0.75
RPL13AP40429 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPL13AP40429 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPL13AP40429 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPL13AP40429 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPL13AP40429 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPL13AP40429 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPL13AP40429 AL161658.1-201ENST00000623641 1967 ntBASIC19.65■□□□□ 0.74
RPL13AP40429 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL13AP40429 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.65■□□□□ 0.74
RPL13AP40429 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.65■□□□□ 0.74
RPL13AP40429 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPL13AP40429 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL13AP40429 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPL13AP40429 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPL13AP40429 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPL13AP40429 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.61■□□□□ 0.73
RPL13AP40429 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.6■□□□□ 0.73
RPL13AP40429 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPL13AP40429 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RPL13AP40429 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPL13AP40429 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.58■□□□□ 0.72
RPL13AP40429 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.54■□□□□ 0.72
RPL13AP40429 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.51■□□□□ 0.71
RPL13AP40429 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPL13AP40429 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPL13AP40429 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPL13AP40429 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.47■□□□□ 0.71
RPL13AP40429 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
RPL13AP40429 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.46■□□□□ 0.71
RPL13AP40429 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPL13AP40429 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPL13AP40429 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPL13AP40429 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
RPL13AP40429 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPL13AP40429 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPL13AP40429 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPL13AP40429 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL13AP40429 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPL13AP40429 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RPL13AP40429 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL13AP40429 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPL13AP40429 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RPL13AP40429 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RPL13AP40429 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RPL13AP40429 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RPL13AP40429 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPL13AP40429 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.36■□□□□ 0.69
RPL13AP40429 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RPL13AP40429 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPL13AP40429 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPL13AP40429 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.34■□□□□ 0.69
RPL13AP40429 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPL13AP40429 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPL13AP40429 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPL13AP40429 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL13AP40429 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL13AP40429 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL13AP40429 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPL13AP40429 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL13AP40429 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.3■□□□□ 0.68
RPL13AP40429 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
RPL13AP40429 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPL13AP40429 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms