Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 CCT6YDR188W 1641 nt12.83□□□□□ -0.36
VPS41P38959 GFD2YCL036W 1701 nt12.82□□□□□ -0.36
VPS41P38959 ART5YGR068C 1761 nt12.79□□□□□ -0.36
VPS41P38959 RTS2YOR077W 699 nt12.79□□□□□ -0.36
VPS41P38959 RRT12YCR045C 1476 nt12.77□□□□□ -0.37
VPS41P38959 SUF2tP(AGG)C 72 nt12.73□□□□□ -0.37
VPS41P38959 SUF10tP(AGG)N 72 nt12.73□□□□□ -0.37
VPS41P38959 PST2YDR032C 597 nt12.72□□□□□ -0.37
VPS41P38959 PTK1YKL198C 1989 nt12.7□□□□□ -0.38
VPS41P38959 BOP3YNL042W 1191 nt12.7□□□□□ -0.38
VPS41P38959 LSM3YLR438C-A 270 nt12.69□□□□□ -0.38
VPS41P38959 WWM1YFL010C 636 nt12.65□□□□□ -0.38
VPS41P38959 PET9YBL030C 957 nt12.64□□□□□ -0.39
VPS41P38959 CUE1YMR264W 612 nt12.64□□□□□ -0.39
VPS41P38959 FPS1YLL043W 2010 nt12.61□□□□□ -0.39
VPS41P38959 YNL195CYNL195C 786 nt12.55□□□□□ -0.4
VPS41P38959 NCP1YHR042W 2076 nt12.49□□□□□ -0.41
VPS41P38959 TIR4YOR009W 1464 nt12.47□□□□□ -0.41
VPS41P38959 YCH1YGR203W 447 nt12.47□□□□□ -0.41
VPS41P38959 YIL100WYIL100W 354 nt12.46□□□□□ -0.41
VPS41P38959 Q0182Q0182 405 nt12.45□□□□□ -0.42
VPS41P38959 YFL021C-AYFL021C-A 855 nt12.42□□□□□ -0.42
VPS41P38959 BOR1YNL275W 1731 nt12.42□□□□□ -0.42
VPS41P38959 YMR057CYMR057C 372 nt12.41□□□□□ -0.42
VPS41P38959 YFL054CYFL054C 1941 nt12.39□□□□□ -0.43
VPS41P38959 UME6YDR207C 2511 nt12.37□□□□□ -0.43
VPS41P38959 SPT8YLR055C 1809 nt12.34□□□□□ -0.43
VPS41P38959 YLR236CYLR236C 324 nt12.3□□□□□ -0.44
VPS41P38959 YGR021WYGR021W 873 nt12.27□□□□□ -0.45
VPS41P38959 SHU1YHL006C 453 nt12.27□□□□□ -0.45
VPS41P38959 HOM6YJR139C 1080 nt12.24□□□□□ -0.45
VPS41P38959 LCB1YMR296C 1677 nt12.2□□□□□ -0.46
VPS41P38959 YAL037C-BYAL037C-B 975 nt12.16□□□□□ -0.46
VPS41P38959 HSP60YLR259C 1719 nt12.1□□□□□ -0.47
VPS41P38959 SWE1YJL187C 2460 nt12.1□□□□□ -0.47
VPS41P38959 NPL3YDR432W 1245 nt12.08□□□□□ -0.48
VPS41P38959 MNP1YGL068W 585 nt12.08□□□□□ -0.48
VPS41P38959 YKL097CYKL097C 411 nt12.08□□□□□ -0.48
VPS41P38959 RKM5YLR137W 1104 nt12.05□□□□□ -0.48
VPS41P38959 MCH5YOR306C 1566 nt12.04□□□□□ -0.48
VPS41P38959 YCL048W-AYCL048W-A 240 nt12.02□□□□□ -0.49
VPS41P38959 ALG12YNR030W 1656 nt12□□□□□ -0.49
VPS41P38959 YJL152WYJL152W 360 nt11.98□□□□□ -0.49
VPS41P38959 LYS4YDR234W 2082 nt11.96□□□□□ -0.49
VPS41P38959 GLK1YCL040W 1503 nt11.91□□□□□ -0.5
VPS41P38959 YLR154C-GYLR154C-G 150 nt11.91□□□□□ -0.5
VPS41P38959 YJL225CYJL225C 5277 nt11.9□□□□□ -0.5
VPS41P38959 SIM1YIL123W 1431 nt11.86□□□□□ -0.51
VPS41P38959 RRD1YIL153W 1182 nt11.8□□□□□ -0.52
VPS41P38959 FUR4YBR021W 1902 nt11.79□□□□□ -0.52
VPS41P38959 PCM1YEL058W 1674 nt11.78□□□□□ -0.52
VPS41P38959 BIO4YNR057C 714 nt11.75□□□□□ -0.53
VPS41P38959 FMP52YER004W 696 nt11.73□□□□□ -0.53
VPS41P38959 YOL037CYOL037C 354 nt11.71□□□□□ -0.53
VPS41P38959 PRP4YPR178W 1398 nt11.66□□□□□ -0.54
VPS41P38959 DED1YOR204W 1815 nt11.65□□□□□ -0.54
VPS41P38959 NAR1YNL240C 1476 nt11.65□□□□□ -0.54
VPS41P38959 DSK2YMR276W 1122 nt11.65□□□□□ -0.54
VPS41P38959 YOR139CYOR139C 393 nt11.65□□□□□ -0.54
VPS41P38959 FMT1YBL013W 1206 nt11.64□□□□□ -0.55
VPS41P38959 YEL076C-AYEL076C-A 651 nt11.62□□□□□ -0.55
VPS41P38959 YEL076CYEL076C 651 nt11.62□□□□□ -0.55
VPS41P38959 YHR056W-AYHR056W-A 435 nt11.62□□□□□ -0.55
VPS41P38959 YLR464WYLR464W 651 nt11.62□□□□□ -0.55
VPS41P38959 AAC1YMR056C 930 nt11.62□□□□□ -0.55
VPS41P38959 ADH2YMR303C 1047 nt11.6□□□□□ -0.55
VPS41P38959 CCA1YER168C 1641 nt11.6□□□□□ -0.55
VPS41P38959 DPS1YLL018C 1674 nt11.59□□□□□ -0.55
VPS41P38959 CRR1YLR213C 1269 nt11.59□□□□□ -0.55
VPS41P38959 SNF6YHL025W 999 nt11.57□□□□□ -0.56
VPS41P38959 ERF2YLR246W 1080 nt11.57□□□□□ -0.56
VPS41P38959 CWP1YKL096W 720 nt11.55□□□□□ -0.56
VPS41P38959 GBP2YCL011C 1284 nt11.55□□□□□ -0.56
VPS41P38959 BIO5YNR056C 1686 nt11.52□□□□□ -0.56
VPS41P38959 TCD2YKL027W 1344 nt11.52□□□□□ -0.57
VPS41P38959 MIC10YCL057C-A 294 nt11.51□□□□□ -0.57
VPS41P38959 MOT3YMR070W 1473 nt11.5□□□□□ -0.57
VPS41P38959 IDH1YNL037C 1083 nt11.49□□□□□ -0.57
VPS41P38959 RAX1YOR301W 1308 nt11.49□□□□□ -0.57
VPS41P38959 SNF1YDR477W 1902 nt11.48□□□□□ -0.57
VPS41P38959 PBP1YGR178C 2169 nt11.46□□□□□ -0.57
VPS41P38959 HEM12YDR047W 1089 nt11.46□□□□□ -0.57
VPS41P38959 WHI5YOR083W 888 nt11.46□□□□□ -0.57
VPS41P38959 YLR281CYLR281C 468 nt11.45□□□□□ -0.58
VPS41P38959 YKR005CYKR005C 1578 nt11.44□□□□□ -0.58
VPS41P38959 ATF2YGR177C 1608 nt11.42□□□□□ -0.58
VPS41P38959 YIH1YCR059C 777 nt11.42□□□□□ -0.58
VPS41P38959 BMT6YLR063W 1098 nt11.42□□□□□ -0.58
VPS41P38959 YLL053CYLL053C 459 nt11.41□□□□□ -0.58
VPS41P38959 SNG1YGR197C 1644 nt11.41□□□□□ -0.58
VPS41P38959 CYT2YKL087C 675 nt11.4□□□□□ -0.58
VPS41P38959 SOR2YDL246C 1074 nt11.35□□□□□ -0.59
VPS41P38959 SOR1YJR159W 1074 nt11.35□□□□□ -0.59
VPS41P38959 WSC2YNL283C 1512 nt11.34□□□□□ -0.59
VPS41P38959 RNQ1YCL028W 1218 nt11.33□□□□□ -0.6
VPS41P38959 YFL067WYFL067W 528 nt11.3□□□□□ -0.6
VPS41P38959 YGR259CYGR259C 441 nt11.28□□□□□ -0.6
VPS41P38959 AGP1YCL025C 1902 nt11.27□□□□□ -0.6
VPS41P38959 MXR2YCL033C 507 nt11.27□□□□□ -0.61
VPS41P38959 CMP2YML057W 1815 nt11.27□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms