Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 YLR281CYLR281C 468 nt14.83□□□□□ -0.04
NMD2P38798 EMI2YDR516C 1503 nt14.82□□□□□ -0.04
NMD2P38798 YLR154C-GYLR154C-G 150 nt14.8□□□□□ -0.04
NMD2P38798 ART5YGR068C 1761 nt14.79□□□□□ -0.04
NMD2P38798 WHI5YOR083W 888 nt14.79□□□□□ -0.04
NMD2P38798 TIR4YOR009W 1464 nt14.77□□□□□ -0.04
NMD2P38798 GFD2YCL036W 1701 nt14.75□□□□□ -0.05
NMD2P38798 YDL221WYDL221W 552 nt14.72□□□□□ -0.05
NMD2P38798 tM(CAU)CtM(CAU)C 72 nt14.71□□□□□ -0.05
NMD2P38798 IMT4tM(CAU)E 72 nt14.71□□□□□ -0.05
NMD2P38798 IMT3tM(CAU)J3 72 nt14.71□□□□□ -0.05
NMD2P38798 IMT1tM(CAU)O1 72 nt14.71□□□□□ -0.05
NMD2P38798 IMT2tM(CAU)P 72 nt14.71□□□□□ -0.05
NMD2P38798 PET9YBL030C 957 nt14.68□□□□□ -0.06
NMD2P38798 YMR090WYMR090W 684 nt14.67□□□□□ -0.06
NMD2P38798 YCH1YGR203W 447 nt14.66□□□□□ -0.06
NMD2P38798 YJL152WYJL152W 360 nt14.66□□□□□ -0.06
NMD2P38798 PUS2YGL063W 1113 nt14.64□□□□□ -0.07
NMD2P38798 IRC15YPL017C 1500 nt14.64□□□□□ -0.07
NMD2P38798 YMR057CYMR057C 372 nt14.58□□□□□ -0.08
NMD2P38798 RTS2YOR077W 699 nt14.57□□□□□ -0.08
NMD2P38798 YBR220CYBR220C 1683 nt14.57□□□□□ -0.08
NMD2P38798 SDH1YKL148C 1923 nt14.54□□□□□ -0.08
NMD2P38798 GIS3YLR094C 1509 nt14.52□□□□□ -0.08
NMD2P38798 PAC11YDR488C 1602 nt14.5□□□□□ -0.09
NMD2P38798 DSK2YMR276W 1122 nt14.48□□□□□ -0.09
NMD2P38798 YLR236CYLR236C 324 nt14.47□□□□□ -0.09
NMD2P38798 SCC4YER147C 1875 nt14.45□□□□□ -0.1
NMD2P38798 YPR011CYPR011C 981 nt14.44□□□□□ -0.1
NMD2P38798 FPS1YLL043W 2010 nt14.43□□□□□ -0.1
NMD2P38798 IMP2'YIL154C 1041 nt14.43□□□□□ -0.1
NMD2P38798 BDF1YLR399C 2061 nt14.43□□□□□ -0.1
NMD2P38798 CUE1YMR264W 612 nt14.42□□□□□ -0.1
NMD2P38798 YCL048W-AYCL048W-A 240 nt14.41□□□□□ -0.1
NMD2P38798 IDH1YNL037C 1083 nt14.4□□□□□ -0.1
NMD2P38798 NVJ2YPR091C 2313 nt14.35□□□□□ -0.11
NMD2P38798 GBP2YCL011C 1284 nt14.3□□□□□ -0.12
NMD2P38798 FMP45YDL222C 930 nt14.28□□□□□ -0.12
NMD2P38798 TAT1YBR069C 1860 nt14.25□□□□□ -0.13
NMD2P38798 YIL100WYIL100W 354 nt14.22□□□□□ -0.13
NMD2P38798 YDR433WYDR433W 441 nt14.21□□□□□ -0.13
NMD2P38798 LPX1YOR084W 1164 nt14.21□□□□□ -0.13
NMD2P38798 ERV46YAL042W 1248 nt14.2□□□□□ -0.14
NMD2P38798 RRD1YIL153W 1182 nt14.18□□□□□ -0.14
NMD2P38798 DED1YOR204W 1815 nt14.15□□□□□ -0.14
NMD2P38798 TCD2YKL027W 1344 nt14.15□□□□□ -0.15
NMD2P38798 MXR2YCL033C 507 nt14.14□□□□□ -0.15
NMD2P38798 YSC84YHR016C 1407 nt14.1□□□□□ -0.15
NMD2P38798 YKR040CYKR040C 504 nt14.06□□□□□ -0.16
NMD2P38798 YHL050CYHL050C 2094 nt14.06□□□□□ -0.16
NMD2P38798 RRT12YCR045C 1476 nt14.06□□□□□ -0.16
NMD2P38798 YNL195CYNL195C 786 nt14.02□□□□□ -0.17
NMD2P38798 SEC11YIR022W 504 nt14.01□□□□□ -0.17
NMD2P38798 FMT1YBL013W 1206 nt14.01□□□□□ -0.17
NMD2P38798 FMP52YER004W 696 nt13.97□□□□□ -0.17
NMD2P38798 PCH2YBR186W 1695 nt13.96□□□□□ -0.17
NMD2P38798 SOR2YDL246C 1074 nt13.91□□□□□ -0.18
NMD2P38798 SOR1YJR159W 1074 nt13.91□□□□□ -0.18
NMD2P38798 SPP1YPL138C 1062 nt13.91□□□□□ -0.18
NMD2P38798 FRD1YEL047C 1413 nt13.9□□□□□ -0.18
NMD2P38798 GUT2YIL155C 1950 nt13.89□□□□□ -0.19
NMD2P38798 YCL042WYCL042W 360 nt13.86□□□□□ -0.19
NMD2P38798 CWP1YKL096W 720 nt13.85□□□□□ -0.19
NMD2P38798 ADH2YMR303C 1047 nt13.84□□□□□ -0.19
NMD2P38798 PCM1YEL058W 1674 nt13.82□□□□□ -0.2
NMD2P38798 SNF6YHL025W 999 nt13.74□□□□□ -0.21
NMD2P38798 PIB2YGL023C 1908 nt13.72□□□□□ -0.21
NMD2P38798 LCB1YMR296C 1677 nt13.69□□□□□ -0.22
NMD2P38798 NCP1YHR042W 2076 nt13.67□□□□□ -0.22
NMD2P38798 RTF1YGL244W 1677 nt13.66□□□□□ -0.22
NMD2P38798 PTH1YHR189W 573 nt13.64□□□□□ -0.23
NMD2P38798 SIM1YIL123W 1431 nt13.63□□□□□ -0.23
NMD2P38798 BOP3YNL042W 1191 nt13.62□□□□□ -0.23
NMD2P38798 BIO4YNR057C 714 nt13.62□□□□□ -0.23
NMD2P38798 YIH1YCR059C 777 nt13.61□□□□□ -0.23
NMD2P38798 RTG1YOL067C 534 nt13.61□□□□□ -0.23
NMD2P38798 RNQ1YCL028W 1218 nt13.58□□□□□ -0.24
NMD2P38798 DIC1YLR348C 897 nt13.57□□□□□ -0.24
NMD2P38798 YLR235CYLR235C 399 nt13.56□□□□□ -0.24
NMD2P38798 MRPL8YJL063C 717 nt13.5□□□□□ -0.25
NMD2P38798 YEL076C-AYEL076C-A 651 nt13.49□□□□□ -0.25
NMD2P38798 YEL076CYEL076C 651 nt13.49□□□□□ -0.25
NMD2P38798 YLL053CYLL053C 459 nt13.49□□□□□ -0.25
NMD2P38798 YLR464WYLR464W 651 nt13.49□□□□□ -0.25
NMD2P38798 PTK1YKL198C 1989 nt13.47□□□□□ -0.25
NMD2P38798 YKL030WYKL030W 606 nt13.47□□□□□ -0.25
NMD2P38798 TIM23YNR017W 669 nt13.44□□□□□ -0.26
NMD2P38798 LYS4YDR234W 2082 nt13.41□□□□□ -0.26
NMD2P38798 FTR1YER145C 1215 nt13.39□□□□□ -0.27
NMD2P38798 ERF2YLR246W 1080 nt13.38□□□□□ -0.27
NMD2P38798 YLR179CYLR179C 606 nt13.37□□□□□ -0.27
NMD2P38798 CRR1YLR213C 1269 nt13.37□□□□□ -0.27
NMD2P38798 GAL1YBR020W 1587 nt13.37□□□□□ -0.27
NMD2P38798 ADO1YJR105W 1023 nt13.36□□□□□ -0.27
NMD2P38798 ATF2YGR177C 1608 nt13.34□□□□□ -0.27
NMD2P38798 TRM5YHR070W 1500 nt13.33□□□□□ -0.28
NMD2P38798 HUA1YGR268C 597 nt13.31□□□□□ -0.28
NMD2P38798 WSC2YNL283C 1512 nt13.29□□□□□ -0.28
NMD2P38798 AQY1YPR192W 918 nt13.29□□□□□ -0.28
NMD2P38798 YFL067WYFL067W 528 nt13.26□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms