Protein–RNA interactions for Protein: P33749

MSN4, Zinc finger protein MSN4, yeastyeast

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSN4P33749 YOR139CYOR139C 393 nt11.15□□□□□ -0.62
MSN4P33749 PAC11YDR488C 1602 nt11.13□□□□□ -0.63
MSN4P33749 PTP1YDL230W 1008 nt11.11□□□□□ -0.63
MSN4P33749 YMR090WYMR090W 684 nt11.11□□□□□ -0.63
MSN4P33749 EMI2YDR516C 1503 nt11.1□□□□□ -0.63
MSN4P33749 CAC2YML102W 1407 nt11.06□□□□□ -0.64
MSN4P33749 ART5YGR068C 1761 nt11.02□□□□□ -0.65
MSN4P33749 YDL221WYDL221W 552 nt11.01□□□□□ -0.65
MSN4P33749 YJL152WYJL152W 360 nt10.97□□□□□ -0.65
MSN4P33749 YLR154C-GYLR154C-G 150 nt10.96□□□□□ -0.65
MSN4P33749 PET9YBL030C 957 nt10.96□□□□□ -0.65
MSN4P33749 GFD2YCL036W 1701 nt10.95□□□□□ -0.66
MSN4P33749 YCH1YGR203W 447 nt10.94□□□□□ -0.66
MSN4P33749 TIR4YOR009W 1464 nt10.93□□□□□ -0.66
MSN4P33749 WHI5YOR083W 888 nt10.91□□□□□ -0.66
MSN4P33749 YLR281CYLR281C 468 nt10.9□□□□□ -0.66
MSN4P33749 YBR220CYBR220C 1683 nt10.89□□□□□ -0.67
MSN4P33749 IRC15YPL017C 1500 nt10.89□□□□□ -0.67
MSN4P33749 SDH1YKL148C 1923 nt10.88□□□□□ -0.67
MSN4P33749 RTS2YOR077W 699 nt10.88□□□□□ -0.67
MSN4P33749 YMR057CYMR057C 372 nt10.87□□□□□ -0.67
MSN4P33749 GIS3YLR094C 1509 nt10.84□□□□□ -0.67
MSN4P33749 SCC4YER147C 1875 nt10.83□□□□□ -0.68
MSN4P33749 PUS2YGL063W 1113 nt10.78□□□□□ -0.68
MSN4P33749 YCL048W-AYCL048W-A 240 nt10.78□□□□□ -0.68
MSN4P33749 CUE1YMR264W 612 nt10.76□□□□□ -0.69
MSN4P33749 tM(CAU)CtM(CAU)C 72 nt10.74□□□□□ -0.69
MSN4P33749 IMT4tM(CAU)E 72 nt10.74□□□□□ -0.69
MSN4P33749 IMT3tM(CAU)J3 72 nt10.74□□□□□ -0.69
MSN4P33749 IMT1tM(CAU)O1 72 nt10.74□□□□□ -0.69
MSN4P33749 IMT2tM(CAU)P 72 nt10.74□□□□□ -0.69
MSN4P33749 IDH1YNL037C 1083 nt10.71□□□□□ -0.69
MSN4P33749 MOT3YMR070W 1473 nt10.69□□□□□ -0.7
MSN4P33749 YIL100WYIL100W 354 nt10.69□□□□□ -0.7
MSN4P33749 IMP2'YIL154C 1041 nt10.69□□□□□ -0.7
MSN4P33749 YLR236CYLR236C 324 nt10.69□□□□□ -0.7
MSN4P33749 DSK2YMR276W 1122 nt10.66□□□□□ -0.7
MSN4P33749 GBP2YCL011C 1284 nt10.63□□□□□ -0.71
MSN4P33749 YNL195CYNL195C 786 nt10.61□□□□□ -0.71
MSN4P33749 GUT2YIL155C 1950 nt10.58□□□□□ -0.72
MSN4P33749 PCH2YBR186W 1695 nt10.58□□□□□ -0.72
MSN4P33749 YSC84YHR016C 1407 nt10.57□□□□□ -0.72
MSN4P33749 SEC11YIR022W 504 nt10.56□□□□□ -0.72
MSN4P33749 YDR433WYDR433W 441 nt10.55□□□□□ -0.72
MSN4P33749 YPR011CYPR011C 981 nt10.53□□□□□ -0.72
MSN4P33749 TCD2YKL027W 1344 nt10.53□□□□□ -0.72
MSN4P33749 RRT12YCR045C 1476 nt10.52□□□□□ -0.73
MSN4P33749 FMP45YDL222C 930 nt10.51□□□□□ -0.73
MSN4P33749 PIB2YGL023C 1908 nt10.49□□□□□ -0.73
MSN4P33749 YHL050CYHL050C 2094 nt10.48□□□□□ -0.73
MSN4P33749 RRD1YIL153W 1182 nt10.46□□□□□ -0.73
MSN4P33749 LPX1YOR084W 1164 nt10.43□□□□□ -0.74
MSN4P33749 MXR2YCL033C 507 nt10.43□□□□□ -0.74
MSN4P33749 ERV46YAL042W 1248 nt10.41□□□□□ -0.74
MSN4P33749 DED1YOR204W 1815 nt10.41□□□□□ -0.74
MSN4P33749 YKR040CYKR040C 504 nt10.39□□□□□ -0.75
MSN4P33749 FMP52YER004W 696 nt10.38□□□□□ -0.75
MSN4P33749 RPM1RPM1 483 nt10.38□□□□□ -0.75
MSN4P33749 UME6YDR207C 2511 nt10.35□□□□□ -0.75
MSN4P33749 YCL042WYCL042W 360 nt10.34□□□□□ -0.75
MSN4P33749 CWP1YKL096W 720 nt10.32□□□□□ -0.76
MSN4P33749 FMT1YBL013W 1206 nt10.32□□□□□ -0.76
MSN4P33749 PCM1YEL058W 1674 nt10.29□□□□□ -0.76
MSN4P33749 ADH2YMR303C 1047 nt10.27□□□□□ -0.77
MSN4P33749 RTF1YGL244W 1677 nt10.27□□□□□ -0.77
MSN4P33749 SNF6YHL025W 999 nt10.26□□□□□ -0.77
MSN4P33749 BOP3YNL042W 1191 nt10.26□□□□□ -0.77
MSN4P33749 SOR2YDL246C 1074 nt10.24□□□□□ -0.77
MSN4P33749 SOR1YJR159W 1074 nt10.24□□□□□ -0.77
MSN4P33749 FRD1YEL047C 1413 nt10.24□□□□□ -0.77
MSN4P33749 SIM1YIL123W 1431 nt10.21□□□□□ -0.78
MSN4P33749 PTK1YKL198C 1989 nt10.17□□□□□ -0.78
MSN4P33749 LCB1YMR296C 1677 nt10.17□□□□□ -0.78
MSN4P33749 SPP1YPL138C 1062 nt10.16□□□□□ -0.78
MSN4P33749 NCP1YHR042W 2076 nt10.13□□□□□ -0.79
MSN4P33749 BIO4YNR057C 714 nt10.11□□□□□ -0.79
MSN4P33749 YJL225CYJL225C 5277 nt10.09□□□□□ -0.79
MSN4P33749 PTH1YHR189W 573 nt10.08□□□□□ -0.8
MSN4P33749 RNQ1YCL028W 1218 nt10.08□□□□□ -0.8
MSN4P33749 YIH1YCR059C 777 nt10.07□□□□□ -0.8
MSN4P33749 YLR235CYLR235C 399 nt10.05□□□□□ -0.8
MSN4P33749 DIC1YLR348C 897 nt10.05□□□□□ -0.8
MSN4P33749 YLL053CYLL053C 459 nt10.03□□□□□ -0.8
MSN4P33749 RDN37-1RDN37-1 5354 nt10.01□□□□□ -0.81
MSN4P33749 RDN37-2RDN37-2 5354 nt10.01□□□□□ -0.81
MSN4P33749 ERF2YLR246W 1080 nt9.99□□□□□ -0.81
MSN4P33749 YFL054CYFL054C 1941 nt9.97□□□□□ -0.81
MSN4P33749 FTR1YER145C 1215 nt9.95□□□□□ -0.82
MSN4P33749 YKL030WYKL030W 606 nt9.95□□□□□ -0.82
MSN4P33749 TIM23YNR017W 669 nt9.95□□□□□ -0.82
MSN4P33749 BOR1YNL275W 1731 nt9.95□□□□□ -0.82
MSN4P33749 LYS4YDR234W 2082 nt9.94□□□□□ -0.82
MSN4P33749 YLR179CYLR179C 606 nt9.93□□□□□ -0.82
MSN4P33749 CRR1YLR213C 1269 nt9.92□□□□□ -0.82
MSN4P33749 GAL1YBR020W 1587 nt9.92□□□□□ -0.82
MSN4P33749 TRM5YHR070W 1500 nt9.92□□□□□ -0.82
MSN4P33749 YFL067WYFL067W 528 nt9.91□□□□□ -0.82
MSN4P33749 DDR2YOL052C-A 186 nt9.91□□□□□ -0.82
MSN4P33749 ATF2YGR177C 1608 nt9.9□□□□□ -0.82
MSN4P33749 FRE6YLL051C 2139 nt9.89□□□□□ -0.83
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms