Protein–RNA interactions for Protein: P12868

PEP5, E3 ubiquitin-protein ligase PEP5, yeastyeast

Predictions only

Length 1,029 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEP5P12868 TAT1YBR069C 1860 nt12.8□□□□□ -0.36
PEP5P12868 ART5YGR068C 1761 nt12.8□□□□□ -0.36
PEP5P12868 IRC15YPL017C 1500 nt12.78□□□□□ -0.36
PEP5P12868 RKM5YLR137W 1104 nt12.76□□□□□ -0.37
PEP5P12868 GFD2YCL036W 1701 nt12.74□□□□□ -0.37
PEP5P12868 GIS3YLR094C 1509 nt12.72□□□□□ -0.37
PEP5P12868 SCC4YER147C 1875 nt12.72□□□□□ -0.37
PEP5P12868 RTS2YOR077W 699 nt12.71□□□□□ -0.37
PEP5P12868 PET9YBL030C 957 nt12.64□□□□□ -0.39
PEP5P12868 TIR4YOR009W 1464 nt12.63□□□□□ -0.39
PEP5P12868 YMR057CYMR057C 372 nt12.58□□□□□ -0.4
PEP5P12868 YCH1YGR203W 447 nt12.53□□□□□ -0.4
PEP5P12868 YJL152WYJL152W 360 nt12.51□□□□□ -0.41
PEP5P12868 NPL3YDR432W 1245 nt12.49□□□□□ -0.41
PEP5P12868 CUE1YMR264W 612 nt12.49□□□□□ -0.41
PEP5P12868 YSC84YHR016C 1407 nt12.47□□□□□ -0.41
PEP5P12868 PCH2YBR186W 1695 nt12.46□□□□□ -0.41
PEP5P12868 YLR154C-GYLR154C-G 150 nt12.45□□□□□ -0.42
PEP5P12868 YOL037CYOL037C 354 nt12.44□□□□□ -0.42
PEP5P12868 SEC11YIR022W 504 nt12.43□□□□□ -0.42
PEP5P12868 RRT12YCR045C 1476 nt12.4□□□□□ -0.42
PEP5P12868 FPS1YLL043W 2010 nt12.4□□□□□ -0.42
PEP5P12868 GUT2YIL155C 1950 nt12.39□□□□□ -0.43
PEP5P12868 YOR139CYOR139C 393 nt12.39□□□□□ -0.43
PEP5P12868 YHL050CYHL050C 2094 nt12.38□□□□□ -0.43
PEP5P12868 YIL100WYIL100W 354 nt12.38□□□□□ -0.43
PEP5P12868 YCL048W-AYCL048W-A 240 nt12.33□□□□□ -0.44
PEP5P12868 YNL195CYNL195C 786 nt12.32□□□□□ -0.44
PEP5P12868 YLR236CYLR236C 324 nt12.31□□□□□ -0.44
PEP5P12868 WHI5YOR083W 888 nt12.27□□□□□ -0.45
PEP5P12868 YLR281CYLR281C 468 nt12.23□□□□□ -0.45
PEP5P12868 PIB2YGL023C 1908 nt12.2□□□□□ -0.46
PEP5P12868 RTF1YGL244W 1677 nt12.16□□□□□ -0.46
PEP5P12868 IDH1YNL037C 1083 nt12.1□□□□□ -0.47
PEP5P12868 PAC11YDR488C 1602 nt12.1□□□□□ -0.47
PEP5P12868 BOP3YNL042W 1191 nt12.09□□□□□ -0.47
PEP5P12868 GBP2YCL011C 1284 nt12.09□□□□□ -0.47
PEP5P12868 PUS2YGL063W 1113 nt12.05□□□□□ -0.48
PEP5P12868 RRD1YIL153W 1182 nt12.04□□□□□ -0.48
PEP5P12868 PTK1YKL198C 1989 nt11.99□□□□□ -0.49
PEP5P12868 TCD2YKL027W 1344 nt11.98□□□□□ -0.49
PEP5P12868 NCP1YHR042W 2076 nt11.98□□□□□ -0.49
PEP5P12868 DED1YOR204W 1815 nt11.97□□□□□ -0.49
PEP5P12868 DSK2YMR276W 1122 nt11.95□□□□□ -0.5
PEP5P12868 LCB1YMR296C 1677 nt11.94□□□□□ -0.5
PEP5P12868 YDR433WYDR433W 441 nt11.93□□□□□ -0.5
PEP5P12868 tM(CAU)CtM(CAU)C 72 nt11.93□□□□□ -0.5
PEP5P12868 IMT4tM(CAU)E 72 nt11.93□□□□□ -0.5
PEP5P12868 IMT3tM(CAU)J3 72 nt11.93□□□□□ -0.5
PEP5P12868 IMT1tM(CAU)O1 72 nt11.93□□□□□ -0.5
PEP5P12868 IMT2tM(CAU)P 72 nt11.93□□□□□ -0.5
PEP5P12868 YPR011CYPR011C 981 nt11.93□□□□□ -0.5
PEP5P12868 IMP2'YIL154C 1041 nt11.9□□□□□ -0.5
PEP5P12868 FMT1YBL013W 1206 nt11.9□□□□□ -0.5
PEP5P12868 MXR2YCL033C 507 nt11.9□□□□□ -0.5
PEP5P12868 PCM1YEL058W 1674 nt11.88□□□□□ -0.51
PEP5P12868 FMP52YER004W 696 nt11.87□□□□□ -0.51
PEP5P12868 CWP1YKL096W 720 nt11.86□□□□□ -0.51
PEP5P12868 SIM1YIL123W 1431 nt11.85□□□□□ -0.51
PEP5P12868 FMP45YDL222C 930 nt11.84□□□□□ -0.51
PEP5P12868 ADH2YMR303C 1047 nt11.84□□□□□ -0.51
PEP5P12868 YFL054CYFL054C 1941 nt11.81□□□□□ -0.52
PEP5P12868 LPX1YOR084W 1164 nt11.79□□□□□ -0.52
PEP5P12868 SNF6YHL025W 999 nt11.77□□□□□ -0.53
PEP5P12868 YCL042WYCL042W 360 nt11.73□□□□□ -0.53
PEP5P12868 BIO4YNR057C 714 nt11.72□□□□□ -0.53
PEP5P12868 ERV46YAL042W 1248 nt11.7□□□□□ -0.54
PEP5P12868 YKR040CYKR040C 504 nt11.7□□□□□ -0.54
PEP5P12868 SOR2YDL246C 1074 nt11.67□□□□□ -0.54
PEP5P12868 SOR1YJR159W 1074 nt11.67□□□□□ -0.54
PEP5P12868 LYS4YDR234W 2082 nt11.67□□□□□ -0.54
PEP5P12868 SPT8YLR055C 1809 nt11.66□□□□□ -0.54
PEP5P12868 FRD1YEL047C 1413 nt11.65□□□□□ -0.54
PEP5P12868 YLL053CYLL053C 459 nt11.57□□□□□ -0.56
PEP5P12868 YIH1YCR059C 777 nt11.56□□□□□ -0.56
PEP5P12868 RNQ1YCL028W 1218 nt11.54□□□□□ -0.56
PEP5P12868 ERF2YLR246W 1080 nt11.53□□□□□ -0.56
PEP5P12868 CRR1YLR213C 1269 nt11.49□□□□□ -0.57
PEP5P12868 SWE1YJL187C 2460 nt11.48□□□□□ -0.57
PEP5P12868 Q0182Q0182 405 nt11.48□□□□□ -0.57
PEP5P12868 NVJ2YPR091C 2313 nt11.47□□□□□ -0.57
PEP5P12868 ATF2YGR177C 1608 nt11.47□□□□□ -0.57
PEP5P12868 DIC1YLR348C 897 nt11.47□□□□□ -0.57
PEP5P12868 SPP1YPL138C 1062 nt11.46□□□□□ -0.57
PEP5P12868 PTH1YHR189W 573 nt11.45□□□□□ -0.58
PEP5P12868 MIC10YCL057C-A 294 nt11.45□□□□□ -0.58
PEP5P12868 FTR1YER145C 1215 nt11.43□□□□□ -0.58
PEP5P12868 TRM5YHR070W 1500 nt11.42□□□□□ -0.58
PEP5P12868 HEM12YDR047W 1089 nt11.42□□□□□ -0.58
PEP5P12868 GAL1YBR020W 1587 nt11.41□□□□□ -0.58
PEP5P12868 YHR056W-AYHR056W-A 435 nt11.39□□□□□ -0.59
PEP5P12868 SNG1YGR197C 1644 nt11.38□□□□□ -0.59
PEP5P12868 YFL067WYFL067W 528 nt11.38□□□□□ -0.59
PEP5P12868 DDR2YOL052C-A 186 nt11.38□□□□□ -0.59
PEP5P12868 MOT3YMR070W 1473 nt11.34□□□□□ -0.59
PEP5P12868 BOR1YNL275W 1731 nt11.34□□□□□ -0.59
PEP5P12868 RAX1YOR301W 1308 nt11.31□□□□□ -0.6
PEP5P12868 YLR235CYLR235C 399 nt11.29□□□□□ -0.6
PEP5P12868 YDL086C-AYDL086C-A 435 nt11.28□□□□□ -0.6
PEP5P12868 YLR179CYLR179C 606 nt11.28□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 33.3 ms