Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 AC023310.1-201ENST00000554836 735 ntBASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 AC097359.3-201ENST00000603982 1210 ntBASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HCFC2Q9Y5Z7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 AC025279.2-201ENST00000569730 653 ntBASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 AC093813.1-201ENST00000605066 256 ntBASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HCFC2Q9Y5Z7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 AC107373.2-201ENST00000607735 490 ntBASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC2Q9Y5Z7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms