Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2D4Q9Y2X8 AC134407.2-201ENST00000625089 1978 ntBASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AC007292.2-201ENST00000593524 1812 ntBASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AC106881.1-201ENST00000605849 3329 ntBASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AKR1C7P-201ENST00000305623 895 ntBASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AC108073.2-201ENST00000464002 357 ntBASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 KRT18P34-201ENST00000488218 1270 ntBASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AC073648.2-201ENST00000510116 352 ntBASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AC004790.2-201ENST00000623588 572 ntBASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2D4Q9Y2X8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 AC091951.1-201ENST00000512854 2465 ntBASIC11.16□□□□□ -0.62
UBE2D4Q9Y2X8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms