Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 AL353705.2-201ENST00000428243 662 ntBASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 CNN2P2-201ENST00000443536 909 ntBASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 CNN2P3-201ENST00000450201 906 ntBASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 AL136317.3-201ENST00000618497 906 ntBASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 AC008677.1-201ENST00000519230 1561 ntBASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 AL596087.1-201ENST00000400979 1969 ntBASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.71■□□□□ 0.27
PPARGC1AQ9UBK2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PPARGC1AQ9UBK2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PPARGC1AQ9UBK2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
PPARGC1AQ9UBK2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 MIR648-201ENST00000385046 94 ntBASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 MIR6080-201ENST00000617359 66 ntBASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 AC093028.1-201ENST00000622998 982 ntBASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PPARGC1AQ9UBK2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 AC092850.2-201ENST00000623821 2697 ntBASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.69■□□□□ 0.26
PPARGC1AQ9UBK2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms